RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 EDEM3Q9BZQ6 932 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 STXBP5LQ9Y2K9 1186 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 CLDN3O15551 220 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 B4GALT5O43286 388 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 SPOPO43791 374 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 BCRP11274 1271 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 CHRNB2P17787 502 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 FGFR4P22455 802 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 PIK3CAP42336 1068 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 SSR1P43307 286 aaKnown RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 Q3C1V9 767 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 OR5B17Q8NGF7 314 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 MDM1Q8TC05 714 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 RFFLQ8WZ73 363 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 TAF1DQ9H5J8 278 aaPredicted RBP4.06□□□□□ -1.76
BRCA2-206ENST00000544455 CD2APQ9Y5K6 639 aa4.06□□□□□ -1.76
BRCA2-206ENST00000544455 ARIH2O95376 493 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 KCNA2P16389 499 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 PRLRP16471 622 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 GTF2BQ00403 316 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 CAPN12Q6ZSI9 719 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 INTS8Q75QN2 995 aaKnown RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 SV2AQ7L0J3 742 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 MAP4K3Q8IVH8 894 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 CCDC50Q8IVM0 306 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 TXLNBQ8N3L3 684 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 SCFD2Q8WU76 684 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 HAUS1Q96CS2 278 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 RPGRIP1Q96KN7 1286 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 SYT11Q9BT88 431 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 NUP85Q9BW27 656 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 TARS2Q9BW92 718 aaKnown RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 STK33Q9BYT3 514 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 ACBD3Q9H3P7 528 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 TMEM206Q9H813 350 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 PPANQ9NQ55 473 aaKnown RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 NOCTQ9UK39 431 aaKnown RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 TCF7P36402 384 aaPredicted RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 RAP1GAPP47736 663 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 FMO1Q01740 532 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 PAK2Q13177 524 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 VSIG10LQ86VR7 867 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 CCDC25Q86WR0 208 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 IFT20Q8IY31 132 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 TCHPQ9BT92 498 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 SIPA1L1O43166 1804 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 SLX4Q8IY92 1834 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 CST3P01034 146 aaPredicted RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 TMEM253P0C7T8 217 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 EMC2Q15006 297 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 GPD1LQ8N335 351 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 REPS2Q8NFH8 660 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 ZNF564Q8TBZ8 553 aaPredicted RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 BZW2Q9Y6E2 419 aaKnown RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 MYH2Q9UKX2 1941 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 BRWD3Q6RI45 1802 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 IRF6O14896 467 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 USP2O75604 605 aaPredicted RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 VNN1O95497 513 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 PSAPP07602 524 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 SMTNP53814 917 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 ZNF280AP59817 542 aaPredicted RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 DR1Q01658 176 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 MAP3K10Q02779 954 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 TMEM132AQ24JP5 1023 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 EAPPQ56P03 285 aaPredicted RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 HP1BP3Q5SSJ5 553 aaPredicted RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 CATSPERGQ6ZRH7 1159 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 MTMR14Q8NCE2 650 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 HELQQ8TDG4 1101 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 BCAS4Q8TDM0 211 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 EPS8L1Q8TE68 723 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 LRRN4Q8WUT4 740 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 C11orf70Q9BRQ4 267 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 TXNRD2Q9NNW7 524 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 ZNF302Q9NR11 478 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 NENFQ9UMX5 172 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 PI4K2BG5E9Z4 385 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 TMOD1P28289 359 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 PPP2R5AQ15172 486 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 LPAR1Q92633 364 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 APOBEC3GQ9HC16 384 aaKnown RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 JPH1Q9HDC5 661 aaPredicted RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 NOVA2Q9UNW9 492 aaKnown RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 PIAS1O75925 651 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 MAPTP10636 758 aaKnown RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 PDE6CP51160 858 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 IRX5P78411 483 aaPredicted RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 KIF22Q14807 665 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 UAP1Q16222 522 aaPredicted RBP4.05□□□□□ -1.76
BRCA2-206ENST00000544455 QSER1Q2KHR3 1735 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 HSDL1Q3SXM5 330 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 CCDC38Q502W7 563 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 KRT39Q6A163 491 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 CCDC105Q8IYK2 499 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 HES6Q96HZ4 224 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 NT5C1BQ96P26 610 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 FNBP1Q96RU3 617 aa4.05□□□□□ -1.76
BRCA2-206ENST00000544455 CCDC113Q9H0I3 377 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms