RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 C10orf88Q9H8K7 445 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 MLXIPLQ9NP71 852 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 ATP10DQ9P241 1426 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 SPATA31A3Q5VYP0 1347 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 CLRN2A0PK11 232 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 MYBL1P10243 752 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 PLCG1P19174 1290 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 NCALDP61601 193 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 CTTNQ14247 550 aaKnown RBP10.99□□□□□ -0.65
PCDH9-204ENST00000544246 UBE3CQ15386 1083 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 SPDYAQ5MJ70 313 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 OLFML2BQ68BL8 750 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 EEPD1Q7L9B9 569 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 PASD1Q8IV76 773 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.99□□□□□ -0.65
PCDH9-204ENST00000544246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.99□□□□□ -0.65
PCDH9-204ENST00000544246 TTC7AQ9ULT0 858 aaPredicted RBP10.99□□□□□ -0.65
PCDH9-204ENST00000544246 ROBO2Q9HCK4 1378 aa10.99□□□□□ -0.65
PCDH9-204ENST00000544246 M0R3G1 203 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 JAK3P52333 1124 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 CYP27A1Q02318 531 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 KRT17Q04695 432 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 TLK2Q86UE8 772 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 CNKSR1Q969H4 720 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 PRPF18Q99633 342 aaKnown RBP10.98□□□□□ -0.65
PCDH9-204ENST00000544246 PIDD1Q9HB75 910 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 TOPORSQ9NS56 1045 aaPredicted RBP10.98□□□□□ -0.65
PCDH9-204ENST00000544246 BFARQ9NZS9 450 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 GRID2IPA4D2P6 1211 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 TMEM191CA6NGB0 347 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 MMP1P03956 469 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 GPS1Q13098 491 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 SLFNL1Q499Z3 407 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 C16orf62Q7Z3J2 963 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 OR6P1Q8NGX9 317 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 DIS3LQ8TF46 1054 aaKnown RBP10.98□□□□□ -0.65
PCDH9-204ENST00000544246 KIAA1586Q9HCI6 787 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 DFFAO00273 331 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 HIST1H2AGP0C0S8 130 aaPredicted RBP10.98□□□□□ -0.65
PCDH9-204ENST00000544246 HIST1H2ADP20671 130 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 YAF2Q8IY57 180 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 AGR3Q8TD06 166 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 HIST1H2AHQ96KK5 128 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 DNAJC7Q99615 494 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 HIST1H2AJQ99878 128 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 H2AFJQ9BTM1 129 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 USP44Q9H0E7 712 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 FAM49AQ9H0Q0 323 aaPredicted RBP10.98□□□□□ -0.65
PCDH9-204ENST00000544246 CCDC134Q9H6E4 229 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 KANSL2Q9H9L4 492 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 GID8Q9NWU2 228 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 FER1L4A9Z1Z3 1794 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 STXBP3O00186 592 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 GDF11O95390 407 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 ENO1P06733 434 aaKnown RBP10.98□□□□□ -0.65
PCDH9-204ENST00000544246 PNMA6AP0CW24 399 aaPredicted RBP10.98□□□□□ -0.65
PCDH9-204ENST00000544246 GRK2P25098 689 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 PPP3CCP48454 512 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 ZNF235Q14590 738 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 TNIP2Q8NFZ5 429 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 ANKRD49Q8WVL7 239 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 RMDN1Q96DB5 314 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 FOPNLQ96NB1 174 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 DDX50Q9BQ39 737 aaKnown RBP10.98□□□□□ -0.65
PCDH9-204ENST00000544246 NUP85Q9BW27 656 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 BBS2Q9BXC9 721 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 PRAG1Q86YV5 1406 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 DENND3A2RUS2 1198 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 MFAP3LO75121 409 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 FKBP9O95302 570 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 CLK1P49759 484 aaKnown RBP10.98□□□□□ -0.65
PCDH9-204ENST00000544246 PEX3P56589 373 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 HPCAP84074 193 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 NME3Q13232 169 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 FKBP9P1Q75LS8 142 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 ARHGEF3Q9NR81 526 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 PSD3Q9NYI0 1048 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 ZNF804BA4D1E1 1349 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 CDC42BPAQ5VT25 1732 aa10.98□□□□□ -0.65
PCDH9-204ENST00000544246 TK2O00142 265 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 NFIBO00712 420 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 RC3H1Q5TC82 1133 aaKnown RBP10.97□□□□□ -0.65
PCDH9-204ENST00000544246 NUDT18Q6ZVK8 323 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 CCDC103Q8IW40 242 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 THNSL1Q8IYQ7 743 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 ASAP3Q8TDY4 903 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 CMTM5Q96DZ9 223 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 MRPL1Q9BYD6 325 aaKnown RBP10.97□□□□□ -0.65
PCDH9-204ENST00000544246 LGR6Q9HBX8 967 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 AGLP35573 1532 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 ZNF394Q53GI3 561 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 MTHFD1LQ6UB35 978 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 ZNF564Q8TBZ8 553 aaPredicted RBP10.97□□□□□ -0.65
PCDH9-204ENST00000544246 PPP1R14AQ96A00 147 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 C17orf80Q9BSJ5 609 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 ASMTLO95671 621 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 CDC27P30260 824 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 GYS2P54840 703 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 SNAP25P60880 206 aa10.97□□□□□ -0.65
PCDH9-204ENST00000544246 FAM160B2Q86V87 743 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms