RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 AGMOQ6ZNB7 445 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 LRRC55Q6ZSA7 311 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 ECHDC2Q86YB7 292 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 SLC9A9Q8IVB4 645 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 RPUSD2Q8IZ73 545 aaKnown RBP11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 MLKLQ8NB16 471 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 HERVK_113Q902F9 699 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 CCDC47Q96A33 483 aaKnown RBP11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 SYAP1Q96A49 352 aaPredicted RBP11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 DHTKD1Q96HY7 919 aaPredicted RBP11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 FTHL17Q9BXU8 183 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 HSD3B7Q9H2F3 369 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 NXF3Q9H4D5 531 aaKnown RBP11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 FAM105AQ9NUU6 356 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 HES2Q9Y543 173 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 IPPQ9Y573 584 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 PCDHB2Q9Y5E7 798 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 PTPRSQ13332 1948 aa11.68□□□□□ -0.54
NPIPB3-210ENST00000542817 N4BP3O15049 544 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 NPTXRO95502 500 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 ADRB2P07550 413 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 MCF2P10911 925 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 GARTP22102 1010 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 TNFSF9P41273 254 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 CASP4P49662 377 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 LIG4P49917 911 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 WDR5P61964 334 aaKnown RBP11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 FOXR2Q6PJQ5 311 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 ALKAL1Q6UXT8 129 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 STXBP4Q6ZWJ1 553 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 OTOP2Q7RTS6 562 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 TMCO2Q7Z6W1 182 aaPredicted RBP11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 ZBTB33Q86T24 672 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 IRF2BP1Q8IU81 584 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 GSTCDQ8NEC7 633 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 PLEKHO2Q8TD55 490 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 NELFBQ8WX92 580 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 P2RX5Q93086 422 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 BORCS6Q96GS4 357 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 GTPBP4Q9BZE4 634 aaKnown RBP11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 PCIF1Q9H4Z3 704 aa11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 RC3H2Q9HBD1 1191 aaKnown RBP11.67□□□□□ -0.54
NPIPB3-210ENST00000542817 ABHD14A-ACY1A0A1B0GW23 586 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 CLDN3O15551 220 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 BAIAP3O94812 1187 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 FGBP02675 491 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 NR3C1P04150 777 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 STX17P56962 302 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 ZNF445P59923 1031 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 SNRPFP62306 86 aaKnown RBP11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 IKBKEQ14164 716 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 NOLC1Q14978 699 aaKnown RBP eCLIP11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 NCAPHQ15003 741 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 SHHQ15465 462 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 SLC10A6Q3KNW5 377 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 DCAF4L1Q3SXM0 396 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 ZNF568Q3ZCX4 644 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 XKR4Q5GH76 650 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 TWF2Q6IBS0 349 aaKnown RBP11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 KLHL10Q6JEL2 608 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 FAM43BQ6ZT52 329 aaPredicted RBP11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 SLC24A5Q71RS6 500 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 SYCP3Q8IZU3 236 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 LPPQ93052 612 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 BICD1Q96G01 975 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 EEF2KMTQ96G04 330 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 DNAJC25Q9H1X3 360 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 ANO10Q9NW15 660 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 SNTG2Q9NY99 539 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 HSPBP1Q9NZL4 362 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 ANKFY1Q9P2R3 1169 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 RWDD2AQ9UIY3 292 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 CPSF3Q9UKF6 684 aaKnown RBP11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 EXOC7Q9UPT5 735 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 CTNND2Q9UQB3 1225 aa11.66□□□□□ -0.54
NPIPB3-210ENST00000542817 GOLGA8IPA6NC78 632 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 GOLGA8JA6NMD2 632 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 PSMA7O14818 248 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 OGTO15294 1046 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 INPPL1O15357 1258 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 AKAP3O75969 853 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 LETM1O95202 739 aaPredicted RBP11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 STAG3L1P0CL83 205 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 ZSCAN20P17040 1043 aaPredicted RBP11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 AKAP5P24588 427 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 ERCC5P28715 1186 aaPredicted RBP11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 GRM5P41594 1212 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 ACOT2P49753 483 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 GATMP50440 423 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 PAK1Q13153 545 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 MYBPC2Q14324 1141 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 IQCB1Q15051 598 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 ENOX2Q16206 610 aaKnown RBP11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 STX1AQ16623 288 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 EDRF1Q3B7T1 1238 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 ANO6Q4KMQ2 910 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 CT47A1Q5JQC4 288 aaPredicted RBP11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 CLLU1OSQ5K130 101 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 C1orf220Q5T0J3 134 aa11.65□□□□□ -0.54
NPIPB3-210ENST00000542817 FAM109BQ6ICB4 259 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms