RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 FAM189BP81408 668 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 NHLH2Q02577 135 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 MGAT5Q09328 741 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 HNRNPA0Q13151 305 aaKnown RBP3.44□□□□□ -1.86
KNTC1-213ENST00000542727 PRR16Q569H4 304 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 ZKSCAN2Q63HK3 967 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 EFCAB12Q6NXP0 572 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 FRMD7Q6ZUT3 714 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 RD3Q7Z3Z2 195 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 C11orf74Q86VG3 221 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 AHI1Q8N157 1196 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 MSL3Q8N5Y2 521 aaKnown RBP3.44□□□□□ -1.86
KNTC1-213ENST00000542727 OR10H5Q8NGA6 315 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 ZFP28Q8NHY6 868 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 CHTF18Q8WVB6 975 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 ZNF496Q96IT1 587 aaPredicted RBP3.44□□□□□ -1.86
KNTC1-213ENST00000542727 KANSL2Q9H9L4 492 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 SPON1Q9HCB6 807 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 THG1LQ9NWX6 298 aaKnown RBP3.44□□□□□ -1.86
KNTC1-213ENST00000542727 H2AFY2Q9P0M6 372 aaPredicted RBP3.44□□□□□ -1.86
KNTC1-213ENST00000542727 PRSS50Q9UI38 385 aa3.44□□□□□ -1.86
KNTC1-213ENST00000542727 MARCH11A6NNE9 402 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 TBKBP1A7MCY6 615 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 PJA2O43164 708 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 TGM5O43548 720 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 KPNA6O60684 536 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 IGSF3O75054 1194 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 NDUFA10O95299 355 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 CLEC2LP0C7M8 214 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 IL12RB1P42701 662 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 LSSP48449 732 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 SEC24CP53992 1094 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 RNASE9P60153 205 aaKnown RBP3.43□□□□□ -1.86
KNTC1-213ENST00000542727 PPARAQ07869 468 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 TERF2Q15554 542 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 CSRP2Q16527 193 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 C21orf62-AS1Q17RA5 79 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 LRRTM3Q86VH5 581 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 XYLT1Q86Y38 959 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 HOMER1Q86YM7 354 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 CMTR2Q8IYT2 770 aaKnown RBP3.43□□□□□ -1.86
KNTC1-213ENST00000542727 SMC1BQ8NDV3 1235 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 CPEB3Q8NE35 698 aaKnown RBP3.43□□□□□ -1.86
KNTC1-213ENST00000542727 NTN5Q8WTR8 489 aaPredicted RBP3.43□□□□□ -1.86
KNTC1-213ENST00000542727 SNX33Q8WV41 574 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 ANKFY1Q9P2R3 1169 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 EPN1Q9Y6I3 576 aaPredicted RBP3.43□□□□□ -1.86
KNTC1-213ENST00000542727 FPGT-TNNI3KV9GXZ4 949 aa3.43□□□□□ -1.86
KNTC1-213ENST00000542727 PRSS38A1L453 326 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 ZNF891A8MT65 544 aaPredicted RBP3.42□□□□□ -1.86
KNTC1-213ENST00000542727 INO80B-WBP1J3KQ70 363 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 LEFTY2O00292 366 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 PRAMEF4O60810 478 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 PHF2O75151 1096 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 RAB11FIP3O75154 756 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 ITGA10O75578 1167 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 ESRRBO95718 433 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 C1RP00736 705 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 CRHR1P34998 444 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 CLK3P49761 638 aaKnown RBP3.42□□□□□ -1.86
KNTC1-213ENST00000542727 FLT3LGP49771 235 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 SCNN1BP51168 640 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 MANFP55145 182 aaKnown RBP3.42□□□□□ -1.86
KNTC1-213ENST00000542727 UBE3CQ15386 1083 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 BMT2Q1RMZ1 405 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 COLEC12Q5KU26 742 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 BTNL9Q6UXG8 535 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 NXPE1Q8N323 547 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 OR2W6PQ8NHA6 318 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 CAGE1Q8TC20 777 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 TFAP2CQ92754 450 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 NINJ1Q92982 152 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 INO80BQ9C086 356 aaPredicted RBP3.42□□□□□ -1.86
KNTC1-213ENST00000542727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.42□□□□□ -1.86
KNTC1-213ENST00000542727 POGKQ9P215 609 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 PPP2R3BQ9Y5P8 575 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 SPATA31A6Q5VVP1 1343 aa3.42□□□□□ -1.86
KNTC1-213ENST00000542727 FOSP01100 380 aaPredicted RBP3.41□□□□□ -1.86
KNTC1-213ENST00000542727 EGR2P11161 476 aaPredicted RBP3.41□□□□□ -1.86
KNTC1-213ENST00000542727 CXCR5P32302 372 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 MPP3Q13368 585 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 PDCD4Q53EL6 469 aaKnown RBP3.41□□□□□ -1.86
KNTC1-213ENST00000542727 FAM102AQ5T9C2 384 aaPredicted RBP3.41□□□□□ -1.86
KNTC1-213ENST00000542727 SYT12Q8IV01 421 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 SLC41A1Q8IVJ1 513 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 ZNF480Q8WV37 535 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 REXO4Q9GZR2 422 aaKnown RBP3.41□□□□□ -1.86
KNTC1-213ENST00000542727 R3HDMLQ9H3Y0 253 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 GPRC5DQ9NZD1 345 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 RNF181Q9P0P0 153 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 EVLQ9UI08 416 aaPredicted RBP3.41□□□□□ -1.86
KNTC1-213ENST00000542727 TMPRSS11EQ9UL52 423 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 PLAAQ9Y263 795 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 ATP11BQ9Y2G3 1177 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 CDY2AQ9Y6F7 541 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 MAST3O60307 1309 aa3.41□□□□□ -1.86
KNTC1-213ENST00000542727 KDM1AO60341 852 aa3.4□□□□□ -1.87
KNTC1-213ENST00000542727 TMEM127O75204 238 aa3.4□□□□□ -1.87
KNTC1-213ENST00000542727 CDKL5O76039 1030 aa3.4□□□□□ -1.87
KNTC1-213ENST00000542727 CFIP05156 583 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms