RNA–Protein interactions for RNA: ENST00000542694.2

SPTB-205, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-205ENST00000542694 MCF2P10911 925 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 CMA1P23946 247 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 YARSP54577 528 aaKnown RBP17.05■□□□□ 0.32
SPTB-205ENST00000542694 BCAR1P56945 870 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 ALCAMQ13740 583 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 SKIV2LQ15477 1246 aaKnown RBP17.05■□□□□ 0.32
SPTB-205ENST00000542694 CCDC85BQ15834 202 aaPredicted RBP17.05■□□□□ 0.32
SPTB-205ENST00000542694 STXBP4Q6ZWJ1 553 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 DYMQ7RTS9 669 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 CEP57L1Q8IYX8 460 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 LEO1Q8WVC0 666 aaPredicted RBP17.05■□□□□ 0.32
SPTB-205ENST00000542694 MRPS27Q92552 414 aaKnown RBP17.05■□□□□ 0.32
SPTB-205ENST00000542694 HVCN1Q96D96 273 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 BICD1Q96G01 975 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 TMEM169Q96HH4 297 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 GAD1Q99259 594 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 APOL6Q9BWW8 343 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 ST6GALNAC4Q9H4F1 302 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 ALG13Q9NP73 1137 aaKnown RBP17.05■□□□□ 0.32
SPTB-205ENST00000542694 TOPORSQ9NS56 1045 aaPredicted RBP17.05■□□□□ 0.32
SPTB-205ENST00000542694 CIZ1Q9ULV3 898 aaPredicted RBP17.05■□□□□ 0.32
SPTB-205ENST00000542694 FAN1Q9Y2M0 1017 aa17.05■□□□□ 0.32
SPTB-205ENST00000542694 MYMKA6NI61 221 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 K7ENM7 598 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 GRM6O15303 877 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 POLR2DO15514 142 aaKnown RBP17.04■□□□□ 0.32
SPTB-205ENST00000542694 CLDN3O15551 220 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 ZC3H11AO75152 810 aaKnown RBP eCLIP17.04■□□□□ 0.32
SPTB-205ENST00000542694 GTF2BQ00403 316 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
SPTB-205ENST00000542694 AAK1Q2M2I8 961 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 ZNF568Q3ZCX4 644 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 MPZL3Q6UWV2 235 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 CDR2LQ86X02 465 aaPredicted RBP17.04■□□□□ 0.32
SPTB-205ENST00000542694 MICAL1Q8TDZ2 1067 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 LRRC15Q8TF66 581 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 POF1BQ8WVV4 589 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 DHX58Q96C10 678 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 CCDC34Q96HJ3 373 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 TARS2Q9BW92 718 aaKnown RBP17.04■□□□□ 0.32
SPTB-205ENST00000542694 NXF3Q9H4D5 531 aaKnown RBP17.04■□□□□ 0.32
SPTB-205ENST00000542694 NRDE2Q9H7Z3 1164 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 NGRNQ9NPE2 291 aaKnown RBP17.04■□□□□ 0.32
SPTB-205ENST00000542694 KBTBD4Q9NVX7 518 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 KCNH3Q9ULD8 1083 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 TBX20Q9UMR3 447 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 EXOC7Q9UPT5 735 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 HES2Q9Y543 173 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 PCDHB13Q9Y5F0 798 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.04■□□□□ 0.32
SPTB-205ENST00000542694 MYO7AQ13402 2215 aa17.04■□□□□ 0.32
SPTB-205ENST00000542694 COL6A3P12111 3177 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 MEIS3P2A8K0S8 358 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 POMCP01189 267 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 GALTP07902 379 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 IDEP14735 1019 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 AKAP5P24588 427 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 MATR3P43243 847 aaKnown RBP eCLIP17.03■□□□□ 0.32
SPTB-205ENST00000542694 LIG4P49917 911 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 GRIK3Q13003 919 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 HERC4Q5GLZ8 1057 aaPredicted RBP17.03■□□□□ 0.32
SPTB-205ENST00000542694 SLFN12LQ6IEE8 588 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 CNNM4Q6P4Q7 775 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 SLC39A11Q8N1S5 342 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 ACAP3Q96P50 834 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 COLEC11Q9BWP8 271 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 GBP3Q9H0R5 595 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 MRPL44Q9H9J2 332 aaKnown RBP17.03■□□□□ 0.32
SPTB-205ENST00000542694 PTPRHQ9HD43 1115 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 TLR9Q9NR96 1032 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 PANK4Q9NVE7 773 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 SNTG2Q9NY99 539 aa17.03■□□□□ 0.32
SPTB-205ENST00000542694 CDH23Q9H251 3354 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 A0A087X0B3 334 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 GOLGA6L4A6NEF3 574 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 THP07101 528 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 PROZP22891 400 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 MLH1P40692 756 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 GRM5P41594 1212 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 POSTNQ15063 836 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 E2F4Q16254 413 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 EEF1DP3Q658K8 133 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 TAS1R3Q7RTX0 852 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 ZNF720Q7Z2F6 126 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 DNAJC19Q96DA6 116 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 OLFML3Q9NRN5 406 aa17.02■□□□□ 0.32
SPTB-205ENST00000542694 A0A1W2PQ27 194 aa17.01■□□□□ 0.31
SPTB-205ENST00000542694 A0A1W2PQ64 194 aa17.01■□□□□ 0.31
SPTB-205ENST00000542694 A0A1W2PQD8 194 aa17.01■□□□□ 0.31
SPTB-205ENST00000542694 TTLL13PA6NNM8 815 aa17.01■□□□□ 0.31
SPTB-205ENST00000542694 HNRNPDLO14979 420 aaKnown RBP17.01■□□□□ 0.31
SPTB-205ENST00000542694 RECQL4O94761 1208 aa17.01■□□□□ 0.31
SPTB-205ENST00000542694 PIGRP01833 764 aa17.01■□□□□ 0.31
SPTB-205ENST00000542694 MYL1P05976 194 aa17.01■□□□□ 0.31
SPTB-205ENST00000542694 SLFN14P0C7P3 912 aa17.01■□□□□ 0.31
SPTB-205ENST00000542694 NOLC1Q14978 699 aaKnown RBP eCLIP17.01■□□□□ 0.31
SPTB-205ENST00000542694 DDX53Q86TM3 631 aaKnown RBP17.01■□□□□ 0.31
SPTB-205ENST00000542694 TMEM87AQ8NBN3 555 aa17.01■□□□□ 0.31
SPTB-205ENST00000542694 ATXN2LQ8WWM7 1075 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms