RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 CYP4F22Q6NT55 531 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 TRIM65Q6PJ69 517 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 HASPINQ8TF76 798 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 GCOM2Q9BZD3 368 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-208ENST00000542570 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-208ENST00000542570 GOLGA4Q13439 2230 aaKnown RBP10.88□□□□□ -0.67
TOP3A-208ENST00000542570 CXCL11O14625 94 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 MAFGO15525 162 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 MAP3K6O95382 1288 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 FSTL1Q12841 308 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 MYO1EQ12965 1108 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 ALCAMQ13740 583 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 EDRF1Q3B7T1 1238 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 CCDC89Q8N998 374 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 SLC17A8Q8NDX2 589 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 UBA3Q8TBC4 463 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 IQCDQ96DY2 449 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 NUP85Q9BW27 656 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 FAM204AQ9H8W3 233 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 NFU1Q9UMS0 254 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 ATP8A1Q9Y2Q0 1164 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 H7C0C1 242 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 RBAK-RBAKDNI3L0D1 243 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 TBC1D12O60347 775 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 KIAA0754O94854 1291 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 ATP5OP48047 213 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 TMEM119Q4V9L6 283 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 CEP85LQ5SZL2 805 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 CCDC63Q8NA47 563 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-208ENST00000542570 NAP1L3Q99457 506 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-208ENST00000542570 ABCB6Q9NP58 842 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 ARHGAP20Q9P2F6 1191 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 FNDC3AQ9Y2H6 1198 aaKnown RBP10.88□□□□□ -0.67
TOP3A-208ENST00000542570 SNX24Q9Y343 169 aa10.88□□□□□ -0.67
TOP3A-208ENST00000542570 A8MXQ7 604 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 M0QYV0 167 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 POLR2BP30876 1174 aaKnown RBP10.87□□□□□ -0.67
TOP3A-208ENST00000542570 PSMC4P43686 418 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 KIAA1841Q6NSI8 718 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 USP50Q70EL3 339 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-208ENST00000542570 TEX2Q8IWB9 1127 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 CCNYQ8ND76 341 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 LRRN4CLQ8ND94 238 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 SLC20A1Q8WUM9 679 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 ACAP3Q96P50 834 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 LRRC4Q9HBW1 653 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 PRDM5Q9NQX1 630 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-208ENST00000542570 ANKEF1Q9NU02 776 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 FZD9O00144 591 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 SGPL1O95470 568 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 NPTXRO95502 500 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 MYZAPP0CAP1 466 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 AKAP5P24588 427 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 PTGER2P43116 358 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 CBWD6Q4V339 395 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 SGO2Q562F6 1265 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 CBWD3Q5JTY5 395 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 CBWD5Q5RIA9 395 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 DENND2CQ68D51 928 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 MOXD1Q6UVY6 613 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 C1orf186Q6ZWK4 172 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 SV2AQ7L0J3 742 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 CTAGE3PQ8IX95 158 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 CEP120Q8N960 986 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 DNAJB3Q8WWF6 145 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 HSD17B14Q9BPX1 270 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 VPS33BQ9H267 617 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 VPS37BQ9H9H4 285 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 LRFN2Q9ULH4 789 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 POLIQ9UNA4 740 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 COMMD10Q9Y6G5 202 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 METTL7BQ6UX53 244 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 CXCL17Q6UXB2 119 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 BTNL9Q6UXG8 535 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 ANO5Q75V66 913 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 RFX6Q8HWS3 928 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 REXO1L1PQ8IX06 675 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 CCDC33Q8N5R6 958 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 RSAD2Q8WXG1 361 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 SNED1Q8TER0 1413 aa10.87□□□□□ -0.67
TOP3A-208ENST00000542570 EIF3CLB5ME19 914 aaKnown RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 BTBD19C9JJ37 291 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 SGK1O00141 431 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 HBP1O60381 514 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 KRT1P04264 644 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 ITGB3P05106 788 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 CXCL8P10145 99 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 YY1P25490 414 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 RAP1GAPP47736 663 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 CDH8P55286 799 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 YWHAEP62258 255 aaKnown RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 DGKDQ16760 1214 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 MMS22LQ6ZRQ5 1243 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 COG1Q8WTW3 980 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 C1orf54Q8WWF1 131 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 EIF3CQ99613 913 aaKnown RBP10.86□□□□□ -0.67
TOP3A-208ENST00000542570 AGPAT1Q99943 283 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 HEY1Q9Y5J3 304 aa10.86□□□□□ -0.67
TOP3A-208ENST00000542570 CAPN6Q9Y6Q1 641 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms