RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 YEATS4O95619 227 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 GTF2F1P35269 517 aaKnown RBP eCLIP17■□□□□ 0.31
ECHDC2-223ENST00000542552 KCNQ1P51787 676 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 ZNF131P52739 623 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 ADAM15Q13444 863 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 GIT2Q14161 759 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 LEXMQ3ZCV2 418 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 ATF7IP2Q5U623 682 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 FOXD4L5Q5VV16 416 aaPredicted RBP17■□□□□ 0.31
ECHDC2-223ENST00000542552 RASSF8Q8NHQ8 419 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 BCL7CQ8WUZ0 217 aaPredicted RBP17■□□□□ 0.31
ECHDC2-223ENST00000542552 FOXD4L4Q8WXT5 416 aaPredicted RBP17■□□□□ 0.31
ECHDC2-223ENST00000542552 ACO2Q99798 780 aaKnown RBP17■□□□□ 0.31
ECHDC2-223ENST00000542552 TMEM175Q9BSA9 504 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 APOL6Q9BWW8 343 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 STK17AQ9UEE5 414 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 CCDC39Q9UFE4 941 aa17■□□□□ 0.31
ECHDC2-223ENST00000542552 DLL1O00548 723 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 SPTLC2O15270 562 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 ALDH2P05091 517 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 MAPTP10636 758 aaKnown RBP16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 KCNA5P22460 613 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 PROZP22891 400 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 SCNN1GP51170 649 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 SMTNP53814 917 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 NCKAP1LP55160 1127 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 DHX8Q14562 1220 aaKnown RBP16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 STK38Q15208 465 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 DCAF4L1Q3SXM0 396 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 ATL3Q6DD88 541 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 DDX53Q86TM3 631 aaKnown RBP16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 COLGALT2Q8IYK4 626 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 EFHBQ8N7U6 833 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 PPP2R3CQ969Q6 453 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 TMEM169Q96HH4 297 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 ADPGKQ9BRR6 497 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 MRPL4Q9BYD3 311 aaKnown RBP16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 GBP3Q9H0R5 595 aa16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 NGRNQ9NPE2 291 aaKnown RBP16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 LARSQ9P2J5 1176 aaKnown RBP16.99■□□□□ 0.31
ECHDC2-223ENST00000542552 ABLIM1O14639 778 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 NRP1O14786 923 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 TXLNAP40222 546 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 NRIP1P48552 1158 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 TMEM132AQ24JP5 1023 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 RRAGBQ5VZM2 374 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 MICAL1Q8TDZ2 1067 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 FAM193BQ96PV7 902 aaPredicted RBP16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 TCF25Q9BQ70 676 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 TARS2Q9BW92 718 aaKnown RBP16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 VN1R3Q9BXE9 311 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 CLDND1Q9NY35 253 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 SNTG2Q9NY99 539 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 KLK14Q9P0G3 267 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 PARP2Q9UGN5 583 aa16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 TCF20Q9UGU0 1960 aaKnown RBP16.98■□□□□ 0.31
ECHDC2-223ENST00000542552 A0A087X0B3 334 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 HIDE1A8MVS5 230 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 LINC01565O15544 149 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 RECQL4O94761 1208 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 BRD1O95696 1058 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 EFEMP2O95967 443 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 SCP2P22307 547 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 DLX2Q07687 328 aaPredicted RBP16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 GRIK3Q13003 919 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 KCNC3Q14003 757 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 DUSP6Q16828 381 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 PLPP4Q5VZY2 271 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 CCDC73Q6ZRK6 1079 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 MRPL43Q8N983 215 aaKnown RBP16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 FIZ1Q96SL8 496 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 CDCA3Q99618 268 aaPredicted RBP16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 ZBP1Q9H171 429 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 CDT1Q9H211 546 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 IGFLR1Q9H665 355 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 TLE6Q9H808 572 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 PARVGQ9HBI0 331 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 ENTPD7Q9NQZ7 604 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 MARCH5Q9NX47 278 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 FAN1Q9Y2M0 1017 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 ZDHHC9Q9Y397 364 aa16.97■□□□□ 0.31
ECHDC2-223ENST00000542552 H0YCG3 227 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 H3BQ06 376 aaPredicted RBP16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 PTGESO14684 152 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 CUTAO60888 179 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 TBX10O75333 385 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 GLP2RO95838 553 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 SMC1AQ14683 1233 aaKnown RBP16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 NAB2Q15742 525 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 AXDND1Q5T1B0 1012 aaPredicted RBP16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 ZPBP2Q6X784 338 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 TMC7Q7Z402 723 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 HAUS6Q7Z4H7 955 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 APBB1IPQ7Z5R6 666 aaPredicted RBP16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 RBM23Q86U06 439 aaKnown RBP16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 VPS52Q8N1B4 723 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 MYCT1Q8N699 235 aa16.96■□□□□ 0.31
ECHDC2-223ENST00000542552 ADAMTS19Q8TE59 1207 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms