RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 FAM102BQ5T8I3 360 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 FOXR2Q6PJQ5 311 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 TEKT3Q9BXF9 490 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 IDI2Q9BXS1 227 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 GPR88Q9GZN0 384 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 SERPINA10Q9UK55 444 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 ANKRD62A6NC57 917 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 GH1P01241 217 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 VCAM1P19320 739 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 SSTR3P32745 418 aaPredicted RBP16.45■□□□□ 0.22
CNOT9-208ENST00000542068 PRELPP51888 382 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 EIF1ADQ8N9N8 165 aaKnown RBP16.45■□□□□ 0.22
CNOT9-208ENST00000542068 KCNV2Q8TDN2 545 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 GGA2Q9UJY4 613 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 USP20Q9Y2K6 914 aa16.45■□□□□ 0.22
CNOT9-208ENST00000542068 CYP26A1O43174 497 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 PHF2O75151 1096 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 PAX7P23759 505 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 PEX3P56589 373 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 SOX10P56693 466 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 CALCOCO2Q13137 446 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 ZFYVE27Q5T4F4 411 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 TATDN1Q6P1N9 297 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 PADI6Q6TGC4 694 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 FAM47EQ6ZV65 393 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 PRUNE1Q86TP1 453 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 ARHGEF2Q92974 986 aaKnown RBP16.44■□□□□ 0.22
CNOT9-208ENST00000542068 SAAL1Q96ER3 474 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 ZNF70Q9UC06 446 aaPredicted RBP16.44■□□□□ 0.22
CNOT9-208ENST00000542068 VAV3Q9UKW4 847 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 SSR1P43307 286 aaKnown RBP16.44■□□□□ 0.22
CNOT9-208ENST00000542068 NPEPPSP55786 919 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 NACC1Q96RE7 527 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 HEMGNQ9BXL5 484 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 KDM4CQ9H3R0 1056 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 ECT2Q9H8V3 914 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 MRPL11Q9Y3B7 192 aaKnown RBP16.44■□□□□ 0.22
CNOT9-208ENST00000542068 ZMYM2Q9UBW7 1377 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 WNK3Q9BYP7 1800 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 TMEM120BA0PK00 339 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 KLRG2A4D1S0 409 aaPredicted RBP16.44■□□□□ 0.22
CNOT9-208ENST00000542068 SLC16A4O15374 487 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 SLC16A3O15427 465 aaKnown RBP16.44■□□□□ 0.22
CNOT9-208ENST00000542068 NEBLO76041 1014 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 PAEPP09466 180 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 MMP13P45452 471 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 XRCC4Q13426 336 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 AUHQ13825 339 aaKnown RBP16.44■□□□□ 0.22
CNOT9-208ENST00000542068 C6orf118Q5T5N4 469 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 PLA2G4FQ68DD2 849 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 OLIG1Q8TAK6 271 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 NSMCE1Q8WV22 266 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 NENFQ9UMX5 172 aa16.44■□□□□ 0.22
CNOT9-208ENST00000542068 RIPK2O43353 540 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 RARAP10276 462 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 PTGIRP43119 386 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 KYNUQ16719 465 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 STXBP4Q6ZWJ1 553 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 IL31RAQ8NI17 732 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 GMCL1Q96IK5 515 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 FAM187AA6NFU0 413 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 IGF2BP3O00425 579 aaKnown RBP eCLIP16.43■□□□□ 0.22
CNOT9-208ENST00000542068 CHKAP35790 457 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 Q4G0T1 1027 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 XKR9Q5GH70 373 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 LLGL2Q6P1M3 1020 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 ARMC9Q7Z3E5 817 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 EXOC3L1Q86VI1 746 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 ZNF653Q96CK0 615 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 PCDHB18PQ96TA0 734 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 ZSWIM1Q9BR11 485 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 CBWD1Q9BRT8 395 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 TXLNGYQ9BZA5 131 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 INTUQ9ULD6 942 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 PPP3CAQ08209 521 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 SLC47A2Q86VL8 602 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 SEC14L1Q92503 715 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 KLHL29Q96CT2 875 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 BORCS6Q96GS4 357 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 LBHD1Q9BQE6 289 aaPredicted RBP16.43■□□□□ 0.22
CNOT9-208ENST00000542068 NUP85Q9BW27 656 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 EHMT1Q9H9B1 1298 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 GJA3Q9Y6H8 435 aa16.43■□□□□ 0.22
CNOT9-208ENST00000542068 LTBP4Q8N2S1 1624 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 CYP3A7-CYP3A51PA0A087WV96 503 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 UPP2O95045 317 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 CYP3A7P24462 503 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 GPC5P78333 572 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 BFSP1Q12934 665 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 DHX34Q14147 1143 aaKnown RBP16.42■□□□□ 0.22
CNOT9-208ENST00000542068 CDC42EP4Q9H3Q1 356 aaKnown RBP16.42■□□□□ 0.22
CNOT9-208ENST00000542068 GSTTP1A0A1W2PQM5 241 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 BCRP11274 1271 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 HARSP12081 509 aaKnown RBP16.42■□□□□ 0.22
CNOT9-208ENST00000542068 ADCY2Q08462 1091 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 CNGA2Q16280 664 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 LACTB2Q53H82 288 aaPredicted RBP16.42■□□□□ 0.22
CNOT9-208ENST00000542068 RNF207Q6ZRF8 634 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 ZNF720Q7Z2F6 126 aa16.42■□□□□ 0.22
CNOT9-208ENST00000542068 CCDC50Q8IVM0 306 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms