RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 GRAP2O75791 330 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 SLITRK3O94933 977 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 SMTNL2Q2TAL5 461 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 ZC3H18Q86VM9 953 aaKnown RBP17.2■□□□□ 0.34
VARS2-212ENST00000542001 ZNF473Q8WTR7 871 aaKnown RBP17.2■□□□□ 0.34
VARS2-212ENST00000542001 PRMT1Q99873 361 aaKnown RBP17.2■□□□□ 0.34
VARS2-212ENST00000542001 MIF4GDA9UHW6 222 aaKnown RBP17.2■□□□□ 0.34
VARS2-212ENST00000542001 DDX3XO00571 662 aaKnown RBP eCLIP17.2■□□□□ 0.34
VARS2-212ENST00000542001 SMARCA1P28370 1054 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 SREBF1P36956 1147 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 FAM47CQ5HY64 1035 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 SLC47A2Q86VL8 602 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 TAS1R2Q8TE23 839 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 RSRC1Q96IZ7 334 aaKnown RBP17.2■□□□□ 0.34
VARS2-212ENST00000542001 DNAJC5Q9H3Z4 198 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 FAM198AQ9UFP1 575 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 NALCNQ8IZF0 1738 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 ERVK-9P63128 1117 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 FIGNQ5HY92 759 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 CFAP157Q5JU67 520 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 OTUD5Q96G74 571 aa17.2■□□□□ 0.34
VARS2-212ENST00000542001 MRPL47Q9HD33 250 aaKnown RBP17.2■□□□□ 0.34
VARS2-212ENST00000542001 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.2■□□□□ 0.34
VARS2-212ENST00000542001 MEIS2O14770 477 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 DLG4P78352 724 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 KRT76Q01546 638 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 DAB2IPQ5VWQ8 1189 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 DARS2Q6PI48 645 aaKnown RBP17.19■□□□□ 0.34
VARS2-212ENST00000542001 MICALL2Q8IY33 904 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 ARHGEF26Q96DR7 871 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 AFDNP55196 1824 aaKnown RBP17.19■□□□□ 0.34
VARS2-212ENST00000542001 GJB6O95452 261 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 PLS3P13797 630 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 CHN1P15882 459 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 POLR2BP30876 1174 aaKnown RBP17.19■□□□□ 0.34
VARS2-212ENST00000542001 SLMAPQ14BN4 828 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 RNF149Q8NC42 400 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 PIM2Q9P1W9 311 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 DPEP1P16444 411 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 SNCBQ16143 134 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 RSBN1LQ6PCB5 846 aaPredicted RBP17.19■□□□□ 0.34
VARS2-212ENST00000542001 ZNF720Q7Z2F6 126 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 FAM151AQ8WW52 585 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 STMN2Q93045 179 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 CFAP36Q96G28 342 aa17.19■□□□□ 0.34
VARS2-212ENST00000542001 TBX3O15119 743 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 PPP2R5AQ15172 486 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 C6orf118Q5T5N4 469 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 C4orf33Q8N1A6 199 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 CCNYQ8ND76 341 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 TSNARE1Q96NA8 513 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 PODXLO00592 558 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 SCYL3Q8IZE3 742 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 MCPH1Q8NEM0 835 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 KCNV2Q8TDN2 545 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 PYROXD1Q8WU10 500 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 BAP1Q92560 729 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 SLITRK6Q9H5Y7 841 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 CCDC160A6NGH7 325 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 TMEM119Q4V9L6 283 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 CROCCP2Q86T23 111 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 ZBED8Q8IZ13 594 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 CCDC33Q8N5R6 958 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 NLRP7Q8WX94 980 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 JPH1Q9HDC5 661 aaPredicted RBP17.18■□□□□ 0.34
VARS2-212ENST00000542001 HESX1Q9UBX0 185 aa17.18■□□□□ 0.34
VARS2-212ENST00000542001 F8VZ95 297 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 MAP2K7O14733 419 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 ENTPD3O75355 529 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 INHBAP08476 426 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 KRT10P13645 584 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 PEX19P40855 299 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 JAK3P52333 1124 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 NEDD9Q14511 834 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 WDR72Q3MJ13 1102 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 ZNF568Q3ZCX4 644 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 RFX8Q6ZV50 586 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 TATDN2Q93075 761 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 TTC17Q96AE7 1141 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 HVCN1Q96D96 273 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 PITPNM3Q9BZ71 974 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 CNOT7Q9UIV1 285 aaKnown RBP17.17■□□□□ 0.34
VARS2-212ENST00000542001 ATRNO75882 1429 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 A0A0G2JND7 137 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 TCP11X1B4DZS4 312 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 IL9RQ01113 521 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 AMPD2Q01433 879 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 STXBP2Q15833 593 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 IZUMO3Q5VZ72 239 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 EPS8L3Q8TE67 593 aaKnown RBP17.17■□□□□ 0.34
VARS2-212ENST00000542001 ERP44Q9BS26 406 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 ZNF302Q9NR11 478 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 SLC9A2Q9UBY0 812 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 RTN2O75298 545 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 BAG2O95816 211 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 CHRNA3P32297 505 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 PSMD6Q15008 389 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 MEI1Q5TIA1 1274 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 GPD1LQ8N335 351 aa17.17■□□□□ 0.34
VARS2-212ENST00000542001 LRRC15Q8TF66 581 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms