RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 BTNL9Q6UXG8 535 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 ANKS4BQ8N8V4 417 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 CLEC4DQ8WXI8 215 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 ZBTB10Q96DT7 871 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 YIPF3Q9GZM5 350 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 RANBP17Q9H2T7 1088 aaKnown RBP9.83□□□□□ -0.84
THBS3-211ENST00000541990 ZHX3Q9H4I2 956 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 CNOT10Q9H9A5 744 aaKnown RBP9.83□□□□□ -0.84
THBS3-211ENST00000541990 STK17AQ9UEE5 414 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 AFG3L2Q9Y4W6 797 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 PCDHA2Q9Y5H9 948 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 ANKRD63C9JTQ0 380 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 CCDC188H7C350 402 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 DDX3YO15523 660 aaKnown RBP9.83□□□□□ -0.84
THBS3-211ENST00000541990 ASAP2O43150 1006 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 SMNDC1O75940 238 aaKnown RBP eCLIP9.83□□□□□ -0.84
THBS3-211ENST00000541990 ABCB4P21439 1286 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 PMS2P54278 862 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 CNTN2Q02246 1040 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 ADAM9Q13443 819 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 ITIH4Q14624 930 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 ZKSCAN8Q15776 578 aaPredicted RBP9.83□□□□□ -0.84
THBS3-211ENST00000541990 TMEM119Q4V9L6 283 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 ZDHHC14Q8IZN3 488 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 ANKLE1Q8NAG6 615 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 LNX1Q8TBB1 728 aaPredicted RBP9.83□□□□□ -0.84
THBS3-211ENST00000541990 NEK9Q8TD19 979 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 P3H4Q92791 437 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 C18orf8Q96DM3 657 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 NUCKS1Q9H1E3 243 aaKnown RBP9.83□□□□□ -0.84
THBS3-211ENST00000541990 KCTD10Q9H3F6 313 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 SLITRK6Q9H5Y7 841 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 SAMD15Q9P1V8 674 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 CHORDC1Q9UHD1 332 aaPredicted RBP9.83□□□□□ -0.84
THBS3-211ENST00000541990 FEM1BQ9UK73 627 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 PCDHA12Q9UN75 941 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 CSADQ9Y600 493 aa9.83□□□□□ -0.84
THBS3-211ENST00000541990 SFI1A8K8P3 1242 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 MSH4O15457 936 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 RGS16O15492 202 aaPredicted RBP9.82□□□□□ -0.84
THBS3-211ENST00000541990 SNX3O60493 162 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 GSTA1P08263 222 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 POLR2MP0CAP2 368 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 MARCKSL1P49006 195 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 DR1Q01658 176 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 RNASELQ05823 741 aaKnown RBP9.82□□□□□ -0.84
THBS3-211ENST00000541990 CTTNQ14247 550 aaKnown RBP9.82□□□□□ -0.84
THBS3-211ENST00000541990 DCAF17Q5H9S7 520 aaPredicted RBP9.82□□□□□ -0.84
THBS3-211ENST00000541990 DUPD1Q68J44 220 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 MIS18BP1Q6P0N0 1132 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 CRELD2Q6UXH1 353 aaPredicted RBP9.82□□□□□ -0.84
THBS3-211ENST00000541990 SLFN11Q7Z7L1 901 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 SLC17A8Q8NDX2 589 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 CCDC26Q8TAB7 109 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 PIGOQ8TEQ8 1089 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 ALG3Q92685 438 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 LENG9Q96B70 501 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 CENPTQ96BT3 561 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 OPTNQ96CV9 577 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 ARHGEF26Q96DR7 871 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 HES6Q96HZ4 224 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 TXNRD2Q9NNW7 524 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 FAM114A2Q9NRY5 505 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 ZNF112Q9UJU3 913 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 NENFQ9UMX5 172 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 GREB1LQ9C091 1923 aaPredicted RBP9.82□□□□□ -0.84
THBS3-211ENST00000541990 ESYT2A0FGR8 921 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 BTNL10A8MVZ5 291 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 PGK2P07205 417 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 LINGO3P0C6S8 592 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 ALADP13716 330 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 YY1P25490 414 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 PON1P27169 355 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 FXR2P51116 673 aaKnown RBP eCLIP9.82□□□□□ -0.84
THBS3-211ENST00000541990 GALCP54803 685 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 RIPK1Q13546 671 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 LLGL1Q15334 1064 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 Q3C1V9 767 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 DENND2CQ68D51 928 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 GALNT17Q6IS24 598 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 PALB2Q86YC2 1186 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 JAMLQ86YT9 394 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 RNF217Q8TC41 542 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 RMDN2Q96LZ7 410 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 PABPC3Q9H361 631 aaKnown RBP9.82□□□□□ -0.84
THBS3-211ENST00000541990 NOP53Q9NZM5 478 aaKnown RBP9.82□□□□□ -0.84
THBS3-211ENST00000541990 BTBD7Q9P203 1132 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 KIAA1024Q9UPX6 916 aa9.82□□□□□ -0.84
THBS3-211ENST00000541990 TCP11X1B4DZS4 312 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 MED24O75448 989 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 AP1G2O75843 785 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 GFPT2O94808 682 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 OAS1P00973 400 aaKnown RBP9.81□□□□□ -0.84
THBS3-211ENST00000541990 NUDT17P0C025 328 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 ITGB5P18084 799 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 NR2F2P24468 414 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 TUBP50607 506 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 IRX1P78414 480 aaPredicted RBP9.81□□□□□ -0.84
THBS3-211ENST00000541990 CNGA2Q16280 664 aa9.81□□□□□ -0.84
THBS3-211ENST00000541990 HERC4Q5GLZ8 1057 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms