RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ARAP2Q8WZ64 1704 aa6.45□□□□□ -1.38
CPSF7-220ENST00000541963 GPR75-ASB3A0A0A6YYF3 556 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 MANSC4A6NHS7 340 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-220ENST00000541963 ALG1L2C9J202 215 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 M0R2C6 588 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 KRIT1O00522 736 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 NRDCO43847 1150 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 BRINP1O60477 761 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 MAFKO60675 156 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 ENTPD3O75355 529 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 ZBTB48P10074 688 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-220ENST00000541963 PRKCAP17252 672 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 CDK11BP21127 795 aaKnown RBP6.44□□□□□ -1.38
CPSF7-220ENST00000541963 GDNFP39905 211 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 MCAMP43121 646 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 BTDP43251 543 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 TM4SF4P48230 202 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 LBX1P52954 281 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 RRP1P56182 461 aaKnown RBP6.44□□□□□ -1.38
CPSF7-220ENST00000541963 CYP4F8P98187 520 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 OCRLQ01968 901 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 MECOMQ03112 1051 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 MAP3K12Q12852 859 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 TTF1Q15361 905 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-220ENST00000541963 ARHGAP44Q17R89 818 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 C20orf194Q5TEA3 1177 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 MROH9Q5TGP6 573 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 NAA16Q6N069 864 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-220ENST00000541963 PKN3Q6P5Z2 889 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 RASAL3Q86YV0 1011 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 CERS3Q8IU89 383 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 TEX2Q8IWB9 1127 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 LILRA2Q8N149 483 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 DPF3Q92784 378 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 NSUN4Q96CB9 384 aaKnown RBP6.44□□□□□ -1.38
CPSF7-220ENST00000541963 EAF2Q96CJ1 260 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-220ENST00000541963 CEP89Q96ST8 783 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 TTC1Q99614 292 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 JAM3Q9BX67 310 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 IDI2Q9BXS1 227 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 ZNF341Q9BYN7 854 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 TMEM39BQ9GZU3 492 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 IL1RAPL2Q9NP60 686 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 PAK6Q9NQU5 681 aaPredicted RBP6.44□□□□□ -1.38
CPSF7-220ENST00000541963 PRDM7Q9NQW5 492 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 HOMER2Q9NSB8 354 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 SAGE1Q9NXZ1 904 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 DBNLQ9UJU6 430 aaKnown RBP6.44□□□□□ -1.38
CPSF7-220ENST00000541963 MROH7-TTC4A0A0A0MT08 1334 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 GAKO14976 1311 aa6.44□□□□□ -1.38
CPSF7-220ENST00000541963 WNT9AO14904 365 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 WDHD1O75717 1129 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-220ENST00000541963 HSPA8P11142 646 aaKnown RBP6.43□□□□□ -1.38
CPSF7-220ENST00000541963 PYGMP11217 842 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 CACNB3P54284 484 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 TCP10Q12799 353 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 SNX17Q15036 470 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 NR0B2Q15466 257 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 TMEM177Q53S58 311 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 BICRALQ6AI39 1079 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 C11orf74Q86VG3 221 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 DDX42Q86XP3 938 aaKnown RBP eCLIP6.43□□□□□ -1.38
CPSF7-220ENST00000541963 SIRT2Q8IXJ6 389 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.43□□□□□ -1.38
CPSF7-220ENST00000541963 MYLIPQ8WY64 445 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 TEPSINQ96N21 525 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 LRRCC1Q9C099 1032 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 DCTPP1Q9H773 170 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 RNF186Q9NXI6 227 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 GPR160Q9UJ42 338 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 AOX1Q06278 1338 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 CEP350Q5VT06 3117 aa6.43□□□□□ -1.38
CPSF7-220ENST00000541963 AK9Q5TCS8 1911 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 MYH2Q9UKX2 1941 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 CBX4O00257 560 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 ZEB2O60315 1214 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 IDH1O75874 414 aaKnown RBP6.42□□□□□ -1.38
CPSF7-220ENST00000541963 GLRX3O76003 335 aaKnown RBP6.42□□□□□ -1.38
CPSF7-220ENST00000541963 RGS3P49796 1198 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 IL2P60568 153 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 GPR19Q15760 415 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 MIGA2Q7L4E1 593 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 FERMT3Q86UX7 667 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 TEX11Q8IYF3 940 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 AFAP1L2Q8N4X5 818 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 PRPF38AQ8NAV1 312 aaKnown RBP6.42□□□□□ -1.38
CPSF7-220ENST00000541963 CHST14Q8NCH0 376 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.42□□□□□ -1.38
CPSF7-220ENST00000541963 ORAI3Q9BRQ5 295 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 IFT22Q9H7X7 185 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 PPARGC1AQ9UBK2 798 aaKnown RBP6.42□□□□□ -1.38
CPSF7-220ENST00000541963 EBF1Q9UH73 591 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 ACSL6Q9UKU0 697 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 X6R8D5 127 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 AKAP11Q9UKA4 1901 aa6.42□□□□□ -1.38
CPSF7-220ENST00000541963 RPAP1Q9BWH6 1393 aaPredicted RBP6.42□□□□□ -1.38
CPSF7-220ENST00000541963 F2P00734 622 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 HPXP02790 462 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 CKMP06732 381 aa6.41□□□□□ -1.38
CPSF7-220ENST00000541963 KRT15P19012 456 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms