RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 C6P13671 934 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 CYP2C19P33261 490 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 KIR2DL3P43628 341 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 ADAM8P78325 824 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 FOXE3Q13461 319 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 SYCP2LQ5T4T6 812 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 BROXQ5VW32 411 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 CRIP3Q6Q6R5 217 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 FAM111BQ6SJ93 734 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 DGKHQ86XP1 1220 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 ANKRD35Q8N283 1001 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 UIMC1Q96RL1 719 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 TCF25Q9BQ70 676 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 SOX7Q9BT81 388 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 RHOBTB2Q9BYZ6 727 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 SLC13A1Q9BZW2 595 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 C14orf93Q9H972 538 aaKnown RBP5.33□□□□□ -1.56
SNHG1-217ENST00000541578 IL23AQ9NPF7 189 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 PNMA8BQ9ULN7 279 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-217ENST00000541578 SH3BP1Q9Y3L3 701 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 PCDHB6Q9Y5E3 794 aa5.33□□□□□ -1.56
SNHG1-217ENST00000541578 RSF1Q96T23 1441 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-217ENST00000541578 PRSS38A1L453 326 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 CYP27B1O15528 508 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 ABLIM3O94929 683 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 FSHBP01225 129 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 PFKMP08237 780 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 XPAP23025 273 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-217ENST00000541578 ACRV1P26436 265 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 SCAND1P57086 179 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 ARHGAP29Q52LW3 1261 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 EFCAB2Q5VUJ9 269 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 C1orf210Q8IVY1 113 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 SAMD3Q8N6K7 520 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 CDYL2Q8N8U2 506 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 CLRN3Q8NCR9 226 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 FAXDC2Q96IV6 333 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 LRGUKQ96M69 825 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 ZNF341Q9BYN7 854 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 AURKAIP1Q9NWT8 199 aaPredicted RBP5.32□□□□□ -1.56
SNHG1-217ENST00000541578 NCDNQ9UBB6 729 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 USP18Q9UMW8 372 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 IFT140Q96RY7 1462 aa5.32□□□□□ -1.56
SNHG1-217ENST00000541578 LCHNA4D1U4 455 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 FZD7O75084 574 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 GAAP10253 952 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 NPEPPSP55786 919 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 PICALMQ13492 652 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 GTF2H3Q13889 308 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 ZBTB41Q5SVQ8 909 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 SPTY2D1Q68D10 685 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-217ENST00000541578 RASSF3Q86WH2 238 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 CXorf67Q86X51 503 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-217ENST00000541578 TPH2Q8IWU9 490 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 GSPT2Q8IYD1 628 aaKnown RBP5.31□□□□□ -1.56
SNHG1-217ENST00000541578 CMTM4Q8IZR5 234 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 C1orf162Q8NEQ5 155 aaPredicted RBP5.31□□□□□ -1.56
SNHG1-217ENST00000541578 PPP1R14CQ8TAE6 165 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 GAB3Q8WWW8 586 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 RSAD2Q8WXG1 361 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 HSPBAP1Q96EW2 488 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 ANO3Q9BYT9 981 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 WNT8AQ9H1J5 351 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 MS4A5Q9H3V2 200 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 NUMBLQ9Y6R0 609 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 CFTRP13569 1480 aa5.31□□□□□ -1.56
SNHG1-217ENST00000541578 KLHL33A6NCF5 533 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 K7ESF4 209 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 ERC2O15083 957 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 MTSS1O43312 755 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 KDM1AO60341 852 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 NRP2O60462 931 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 LDHAP00338 332 aaKnown RBP5.3□□□□□ -1.56
SNHG1-217ENST00000541578 HSPA6P17066 643 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 GDF5P43026 501 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 GPR15P49685 360 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 ERVK-21P61565 698 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 PURAQ00577 322 aaKnown RBP5.3□□□□□ -1.56
SNHG1-217ENST00000541578 CD69Q07108 199 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 PCBP2Q15366 365 aaKnown RBP eCLIP5.3□□□□□ -1.56
SNHG1-217ENST00000541578 LONRF3Q496Y0 759 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 CCDC178Q5BJE1 867 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 MIIPQ5JXC2 388 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 USP51Q70EK9 711 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 Q8N1X5 172 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 CPA6Q8N4T0 437 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 SLC16A11Q8NCK7 471 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 IL17DQ8TAD2 202 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 ARL8AQ96BM9 186 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 MIEF2Q96C03 454 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 ZNF503Q96F45 646 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 CSRNP2Q9H175 543 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 VTA1Q9NP79 307 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 OBP2AQ9NY56 170 aa5.3□□□□□ -1.56
SNHG1-217ENST00000541578 MROH2BQ7Z745 1585 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 PRDM2Q13029 1718 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
SNHG1-217ENST00000541578 AKAP8O43823 692 aaKnown RBP5.29□□□□□ -1.56
SNHG1-217ENST00000541578 CREB3O43889 395 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms