RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 KPNA6O60684 536 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 VTNP04004 478 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 HMGCRP04035 888 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 SLC9A1P19634 815 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 MATR3P43243 847 aaKnown RBP eCLIP9.43□□□□□ -0.9
THBS3-210ENST00000541576 PHKA2P46019 1235 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 LMAN1P49257 510 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 FMO5P49326 533 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 DLG4P78352 724 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 POU5F1BQ06416 359 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 PLEKHO2Q8TD55 490 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 NFKBIZQ9BYH8 718 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 AGO2Q9UKV8 859 aaKnown RBP9.43□□□□□ -0.9
THBS3-210ENST00000541576 HTTP42858 3142 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 EXTL3O43909 919 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 FKTNO75072 461 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 PGK1P00558 417 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 ACTN1P12814 892 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 CCND3P30281 292 aaPredicted RBP9.43□□□□□ -0.9
THBS3-210ENST00000541576 MBTD1Q05BQ5 628 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 ARHGEF6Q15052 776 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 KIAA0319LQ8IZA0 1049 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 PPP1R13LQ8WUF5 828 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 BAP1Q92560 729 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 ZBTB45Q96K62 511 aaPredicted RBP9.43□□□□□ -0.9
THBS3-210ENST00000541576 PPP1R16BQ96T49 567 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 FAM213AQ9BRX8 229 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 DESI2Q9BSY9 194 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 MSTO1Q9BUK6 570 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 EDEM3Q9BZQ6 932 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 UPF3AQ9H1J1 476 aaKnown RBP9.43□□□□□ -0.9
THBS3-210ENST00000541576 FZD8Q9H461 694 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 KIAA1586Q9HCI6 787 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 SAGE1Q9NXZ1 904 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 GCNT4Q9P109 453 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 THSD7BQ9C0I4 1608 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 A0A087WZ62 844 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 TTLL13PA6NNM8 815 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 ACKR2O00590 384 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 TOM1L1O75674 476 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 PON1P27169 355 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 CBWD6Q4V339 395 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 CBWD3Q5JTY5 395 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 CBWD5Q5RIA9 395 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 C1orf220Q5T0J3 134 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 CACNA2D4Q7Z3S7 1137 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 USP37Q86T82 979 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 GPIHBP1Q8IV16 184 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 ZNF296Q8WUU4 475 aaPredicted RBP9.43□□□□□ -0.9
THBS3-210ENST00000541576 NLRP7Q8WX94 980 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 UBXN4Q92575 508 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 CCDC127Q96BQ5 260 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 MFSD14AQ96MC6 490 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 SCLT1Q96NL6 688 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 FDXACB1Q9BRP7 624 aaPredicted RBP9.43□□□□□ -0.9
THBS3-210ENST00000541576 TCHPQ9BT92 498 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 IFT122Q9HBG6 1241 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 CEP72Q9P209 647 aa9.43□□□□□ -0.9
THBS3-210ENST00000541576 A0A0B4J269 797 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 MBLAC1A4D2B0 266 aaPredicted RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 ZNF233A6NK53 670 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 CLDN3O15551 220 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 ZEB2O60315 1214 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 LDHAP00338 332 aaKnown RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 MYL7Q01449 175 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 CYP24A1Q07973 514 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 PRPF4BQ13523 1007 aaKnown RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 TEX35Q5T0J7 233 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 TMCO3Q6UWJ1 677 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 IFNLR1Q8IU57 520 aaPredicted RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 TMTC1Q8IUR5 882 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 GPATCH11Q8N954 259 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 PXYLP1Q8TE99 480 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 PPP1R13BQ96KQ4 1090 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 ACO2Q99798 780 aaKnown RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 MTG1Q9BT17 334 aaPredicted RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 HAPLN2Q9GZV7 340 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 FAM49AQ9H0Q0 323 aaPredicted RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 MINDY3Q9H8M7 445 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 NLRC4Q9NPP4 1024 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 PLCB1Q9NQ66 1216 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 XPNPEP3Q9NQH7 507 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 PRMT7Q9NVM4 692 aaPredicted RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 ZNHIT6Q9NWK9 470 aaKnown RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 LCMT1Q9UIC8 334 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 N4BP1O75113 896 aaKnown RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 CYP2C9P11712 490 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 NLRP11P59045 1033 aaKnown RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 MCCD1P59942 119 aaPredicted RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 POLR2FP61218 127 aaKnown RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 CETN1Q12798 172 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 BMS1Q14692 1282 aaKnown RBP9.42□□□□□ -0.9
THBS3-210ENST00000541576 MEA1Q16626 185 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 TMEM132AQ24JP5 1023 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 CYP26C1Q6V0L0 522 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 RRAGAQ7L523 313 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 REXO1L1PQ8IX06 675 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 C7orf31Q8N865 590 aa9.42□□□□□ -0.9
THBS3-210ENST00000541576 PARD3BQ8TEW8 1205 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms