RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 SH3GL2Q99962 352 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 ELAC2Q9BQ52 826 aaKnown RBP16.15■□□□□ 0.18
VARS2-211ENST00000541562 HERPUD2Q9BSE4 406 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 CD248Q9HCU0 757 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 SLX4Q8IY92 1834 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 MAP3K6O95382 1288 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 IFNB1P01574 187 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 ZNF526Q8TF50 670 aaPredicted RBP16.14■□□□□ 0.17
VARS2-211ENST00000541562 FAM151AQ8WW52 585 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 ACCSQ96QU6 501 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 TMBIM4Q9HC24 238 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 TUFT1Q9NNX1 390 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 SAE1Q9UBE0 346 aaPredicted RBP16.14■□□□□ 0.17
VARS2-211ENST00000541562 PLCB3Q01970 1234 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 SEL1L2Q5TEA6 688 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 ANO5Q75V66 913 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 GSTA5Q7RTV2 222 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 NLRX1Q86UT6 975 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 PRELID2Q8N945 189 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 WHAMMQ8TF30 809 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 PRMT1Q99873 361 aaKnown RBP16.14■□□□□ 0.17
VARS2-211ENST00000541562 RNF146Q9NTX7 359 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 ADGRA3Q8IWK6 1321 aa16.14■□□□□ 0.17
VARS2-211ENST00000541562 RARAP10276 462 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 RRM1P23921 792 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 C1orf220Q5T0J3 134 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 DENND2CQ68D51 928 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 KIRREL3Q8IZU9 778 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 SYCE1Q8N0S2 351 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 ARFGEF1Q9Y6D6 1849 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 UMODL1Q5DID0 1318 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 ZSCAN5DPP0CG00 497 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 GPC5P78333 572 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 KYNUQ16719 465 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 TMEM270Q6UE05 265 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 SV2AQ7L0J3 742 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 CCDC33Q8N5R6 958 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 LRRC45Q96CN5 670 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 CYFIP2Q96F07 1278 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 HES6Q96HZ4 224 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 PAGR1Q9BTK6 254 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 ZNF536O15090 1300 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 RGS16O15492 202 aaPredicted RBP16.13■□□□□ 0.17
VARS2-211ENST00000541562 ENTPD3O75355 529 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 SRGAP2CP0DJJ0 459 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 ETS1P14921 441 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 CHN1P15882 459 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 TCF4P15884 667 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 CNTN2Q02246 1040 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 PPP2R5CQ13362 524 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 GLE1Q53GS7 698 aaKnown RBP16.13■□□□□ 0.17
VARS2-211ENST00000541562 EPS8L1Q8TE68 723 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 KAT6AQ92794 2004 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 TBC1D31Q96DN5 1066 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 R3HDMLQ9H3Y0 253 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 GINS2Q9Y248 185 aa16.13■□□□□ 0.17
VARS2-211ENST00000541562 R3HDM2Q9Y2K5 976 aaKnown RBP16.13■□□□□ 0.17
VARS2-211ENST00000541562 ANKRD62A6NC57 917 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 ZNF862O60290 1169 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 BANF1O75531 89 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 CHRNB2P17787 502 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 MAPK4P31152 587 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 ERFP50548 548 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 PMS2P54278 862 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 PRPF38AQ8NAV1 312 aaKnown RBP16.12■□□□□ 0.17
VARS2-211ENST00000541562 WRNIP1Q96S55 665 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 AGO4Q9HCK5 861 aaKnown RBP16.12■□□□□ 0.17
VARS2-211ENST00000541562 SUCLA2Q9P2R7 463 aaPredicted RBP16.12■□□□□ 0.17
VARS2-211ENST00000541562 WNK3Q9BYP7 1800 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 FRMPD4Q14CM0 1322 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 SPATA31A6Q5VVP1 1343 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 TTLL13PA6NNM8 815 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 VCAM1P19320 739 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 CHKAP35790 457 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 DMP1Q13316 513 aaPredicted RBP16.12■□□□□ 0.17
VARS2-211ENST00000541562 TRIM50Q86XT4 487 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 ACTRT1Q8TDG2 376 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 FNBP1Q96RU3 617 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 DHX15O43143 795 aaKnown RBP16.12■□□□□ 0.17
VARS2-211ENST00000541562 NRLP54845 237 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 SGO2Q562F6 1265 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 ERP44Q9BS26 406 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 EPN3Q9H201 632 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 CNTNAP1P78357 1384 aa16.12■□□□□ 0.17
VARS2-211ENST00000541562 TMEM253P0C7T8 217 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 PLS3P13797 630 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 CYP11B1P15538 503 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 ADCY8P40145 1251 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 PRKCIP41743 596 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 UBL4BQ8N7F7 174 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 LMO3Q8TAP4 145 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 ATP8B4Q8TF62 1192 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 CLEC4DQ8WXI8 215 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 PPM1EQ8WY54 764 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 TARS2Q9BW92 718 aaKnown RBP16.11■□□□□ 0.17
VARS2-211ENST00000541562 RANBP17Q9H2T7 1088 aaKnown RBP16.11■□□□□ 0.17
VARS2-211ENST00000541562 EHMT1Q9H9B1 1298 aa16.11■□□□□ 0.17
VARS2-211ENST00000541562 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.11■□□□□ 0.17
VARS2-211ENST00000541562 F5H423 210 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms