RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TUT1Q9H6E5 874 aaKnown RBP13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 GUCA1BQ9UMX6 200 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 PAXBP1Q9Y5B6 917 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 PCDHA13Q9Y5I0 950 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 SSU72P8A0A1W2PR75 194 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 FAM170AA1A519 330 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 F8VZ95 297 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 TNPO2O14787 897 aaKnown RBP13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 AKR1B10O60218 316 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 TFRCP02786 760 aaKnown RBP13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 VTNP04004 478 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 PRKCBP05771 671 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 DLATP10515 647 aaKnown RBP13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 BEX3Q00994 111 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 MBTD1Q05BQ5 628 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 KLHL30Q0D2K2 578 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 SREBF2Q12772 1141 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 ARHGAP44Q17R89 818 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 SLC9C1Q4G0N8 1177 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 ARHGAP29Q52LW3 1261 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 EEF1DP3Q658K8 133 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 MTHFD1LQ6UB35 978 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 ZBTB33Q86T24 672 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 KIAA1328Q86T90 577 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 TMC2Q8TDI7 906 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 CAPNS2Q96L46 248 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 ACO2Q99798 780 aaKnown RBP13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 PACSIN1Q9BY11 444 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 PDE11AQ9HCR9 933 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 SLC5A4Q9NY91 659 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 APEX2Q9UBZ4 518 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 SALL4Q9UJQ4 1053 aa13.32□□□□□ -0.28
AP003559.1-201ENST00000540906 CNTNAP2Q9UHC6 1331 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 CA12O43570 354 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 GAS2O43903 313 aaKnown RBP13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 TBC1D8O95759 1140 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 HSPA6P17066 643 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 RGS2P41220 211 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 VAV2P52735 878 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 TERF1P54274 439 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 CHMP4BP1P59074 171 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 MXD4Q14582 209 aaPredicted RBP13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 GRIK4Q16099 956 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 CCDC122Q5T0U0 273 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 SV2AQ7L0J3 742 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 TLK2Q86UE8 772 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 TMEM130Q8N3G9 435 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 KREMEN1Q96MU8 473 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 APBA2Q99767 749 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 MSTO1Q9BUK6 570 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 NUCKS1Q9H1E3 243 aaKnown RBP13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 DEF6Q9H4E7 631 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 L2HGDHQ9H9P8 463 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 IFT122Q9HBG6 1241 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 SETD4Q9NVD3 440 aa13.31□□□□□ -0.28
AP003559.1-201ENST00000540906 A0A087WZ62 844 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 A6NJR5 290 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 ZNF233A6NK53 670 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 FOXN3O00409 490 aaPredicted RBP13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 P4HA2O15460 535 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 EVI5O60447 810 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 CASQ1P31415 396 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 SOX5P35711 763 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 PRKCIP41743 596 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 VEGFBP49765 207 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 PTENP60484 403 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 KRT83P78385 493 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 TRIM32Q13049 653 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 PPFIA1Q13136 1202 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 PSMD6Q15008 389 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 AMHR2Q16671 573 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 DGKDQ16760 1214 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 C15orf39Q6ZRI6 1047 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 CEP120Q8N960 986 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 LNX1Q8TBB1 728 aaPredicted RBP13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 FDXACB1Q9BRP7 624 aaPredicted RBP13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 PI4K2AQ9BTU6 479 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 STK33Q9BYT3 514 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 IFIH1Q9BYX4 1025 aaKnown RBP13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 FZD8Q9H461 694 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 TMEM8AQ9HCN3 771 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 UBE2TQ9NPD8 197 aaPredicted RBP13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 KCNG1Q9UIX4 513 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 NENFQ9UMX5 172 aa13.3□□□□□ -0.28
AP003559.1-201ENST00000540906 MYADML2A6NDP7 307 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 PMM2O15305 246 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 N4BP1O75113 896 aaKnown RBP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 PROZP22891 400 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 MATR3P43243 847 aaKnown RBP eCLIP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 MAGEA1P43355 309 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 KRT39Q6A163 491 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 ZPBP2Q6X784 338 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 ZNF662Q6ZS27 426 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 ZBTB8OSQ8IWT0 167 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 HELQQ8TDG4 1101 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 TATDN2Q93075 761 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 SYT11Q9BT88 431 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 MRPL4Q9BYD3 311 aaKnown RBP13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 PTPRHQ9HD43 1115 aa13.29□□□□□ -0.28
AP003559.1-201ENST00000540906 ADAMTS1Q9UHI8 967 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms