RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 ACSF2Q96CM8 615 aaPredicted RBP18.04■□□□□ 0.48
TRIM65-203ENST00000540812 RXFP1Q9HBX9 757 aa18.04■□□□□ 0.48
TRIM65-203ENST00000540812 GPRC5CQ9NQ84 441 aa18.04■□□□□ 0.48
TRIM65-203ENST00000540812 C2orf16Q68DN1 1984 aa18.04■□□□□ 0.48
TRIM65-203ENST00000540812 POTEMA6NI47 508 aa18.03■□□□□ 0.48
TRIM65-203ENST00000540812 USO1O60763 962 aaKnown RBP18.03■□□□□ 0.48
TRIM65-203ENST00000540812 NPTXRO95502 500 aa18.03■□□□□ 0.48
TRIM65-203ENST00000540812 ADH1AP07327 375 aa18.03■□□□□ 0.48
TRIM65-203ENST00000540812 DSG1Q02413 1049 aa18.03■□□□□ 0.48
TRIM65-203ENST00000540812 NCBP1Q09161 790 aaKnown RBP18.03■□□□□ 0.48
TRIM65-203ENST00000540812 C15orf39Q6ZRI6 1047 aa18.03■□□□□ 0.48
TRIM65-203ENST00000540812 MAEAQ7L5Y9 396 aa18.03■□□□□ 0.48
TRIM65-203ENST00000540812 RABGGTAQ92696 567 aa18.03■□□□□ 0.48
TRIM65-203ENST00000540812 B3GALT6Q96L58 329 aa18.03■□□□□ 0.48
TRIM65-203ENST00000540812 CCDC43Q96MW1 224 aaKnown RBP18.03■□□□□ 0.48
TRIM65-203ENST00000540812 NFKBIZQ9BYH8 718 aa18.03■□□□□ 0.48
TRIM65-203ENST00000540812 TRIM6Q9C030 488 aaPredicted RBP18.03■□□□□ 0.48
TRIM65-203ENST00000540812 KLK14Q9P0G3 267 aa18.03■□□□□ 0.48
TRIM65-203ENST00000540812 GIT1Q9Y2X7 761 aa18.03■□□□□ 0.48
TRIM65-203ENST00000540812 N4BP1O75113 896 aaKnown RBP18.02■□□□□ 0.48
TRIM65-203ENST00000540812 RFPL2O75678 378 aa18.02■□□□□ 0.48
TRIM65-203ENST00000540812 GLUD1P00367 558 aa18.02■□□□□ 0.48
TRIM65-203ENST00000540812 SPATA31C1P0DKV0 1188 aa18.02■□□□□ 0.48
TRIM65-203ENST00000540812 PLXNA3P51805 1871 aa18.02■□□□□ 0.48
TRIM65-203ENST00000540812 NUBP1P53384 320 aa18.02■□□□□ 0.48
TRIM65-203ENST00000540812 CWF19L1Q69YN2 538 aaKnown RBP18.02■□□□□ 0.48
TRIM65-203ENST00000540812 ASTLQ6HA08 431 aaPredicted RBP18.02■□□□□ 0.48
TRIM65-203ENST00000540812 COLEC11Q9BWP8 271 aa18.02■□□□□ 0.48
TRIM65-203ENST00000540812 GPR62Q9BZJ7 368 aa18.02■□□□□ 0.48
TRIM65-203ENST00000540812 KCNK12Q9HB15 430 aa18.02■□□□□ 0.48
TRIM65-203ENST00000540812 CHST7Q9NS84 486 aa18.02■□□□□ 0.48
TRIM65-203ENST00000540812 CACNG4Q9UBN1 327 aa18.02■□□□□ 0.48
TRIM65-203ENST00000540812 SSX2IPQ9Y2D8 614 aa18.02■□□□□ 0.48
TRIM65-203ENST00000540812 CCDC195A0A1B0GUA6 201 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 A0A1B0GUA9 196 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 GFRA3O60609 400 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 SPATA31D3P0C874 917 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 ATP2B1P20020 1258 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 TDGQ13569 410 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 FUT10Q6P4F1 479 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 SLC27A1Q6PCB7 646 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 SPATA31D4Q6ZUB0 917 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 HACE1Q8IYU2 909 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 IRF2BPLQ9H1B7 796 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 MFSD1Q9H3U5 465 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 PARP2Q9UGN5 583 aa18.01■□□□□ 0.47
TRIM65-203ENST00000540812 LRRIQ4A6NIV6 560 aa18■□□□□ 0.47
TRIM65-203ENST00000540812 TTLL13PA6NNM8 815 aa18■□□□□ 0.47
TRIM65-203ENST00000540812 MED24O75448 989 aa18■□□□□ 0.47
TRIM65-203ENST00000540812 NR1I2O75469 434 aa18■□□□□ 0.47
TRIM65-203ENST00000540812 XRCC6P12956 609 aaKnown RBP eCLIP18■□□□□ 0.47
TRIM65-203ENST00000540812 GUCY1B3Q02153 619 aa18■□□□□ 0.47
TRIM65-203ENST00000540812 TRIM29Q14134 588 aa18■□□□□ 0.47
TRIM65-203ENST00000540812 CATSPER3Q86XQ3 398 aa18■□□□□ 0.47
TRIM65-203ENST00000540812 PALB2Q86YC2 1186 aa18■□□□□ 0.47
TRIM65-203ENST00000540812 ZNF707Q96C28 371 aaPredicted RBP18■□□□□ 0.47
TRIM65-203ENST00000540812 WDR6Q9NNW5 1121 aaKnown RBP18■□□□□ 0.47
TRIM65-203ENST00000540812 DUSP12Q9UNI6 340 aa18■□□□□ 0.47
TRIM65-203ENST00000540812 PTPRZ1P23471 2315 aaPredicted RBP18■□□□□ 0.47
TRIM65-203ENST00000540812 TDRD15B5MCY1 1934 aaKnown RBP18■□□□□ 0.47
TRIM65-203ENST00000540812 NARSO43776 548 aaKnown RBP17.99■□□□□ 0.47
TRIM65-203ENST00000540812 ST18O60284 1047 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 NPR3P17342 541 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 RPL17P18621 184 aaKnown RBP17.99■□□□□ 0.47
TRIM65-203ENST00000540812 MCM7P33993 719 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 CLCN5P51795 746 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 NEK4P51957 841 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 GRIK3Q13003 919 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 CDCA2Q69YH5 1023 aaPredicted RBP17.99■□□□□ 0.47
TRIM65-203ENST00000540812 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 GLYCTKQ8IVS8 523 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 FLCNQ8NFG4 579 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 RSAD2Q8WXG1 361 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 BSNDQ8WZ55 320 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 SMG7Q92540 1137 aaKnown RBP17.99■□□□□ 0.47
TRIM65-203ENST00000540812 MYADMQ96S97 322 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 PAAF1Q9BRP4 392 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 RHOBTB2Q9BYZ6 727 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 CXCL16Q9H2A7 254 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 ADAM28Q9UKQ2 775 aa17.99■□□□□ 0.47
TRIM65-203ENST00000540812 RIF1Q5UIP0 2472 aaKnown RBP17.99■□□□□ 0.47
TRIM65-203ENST00000540812 CLUHO75153 1309 aa17.98■□□□□ 0.47
TRIM65-203ENST00000540812 TGM5O43548 720 aa17.98■□□□□ 0.47
TRIM65-203ENST00000540812 PI15O43692 258 aa17.98■□□□□ 0.47
TRIM65-203ENST00000540812 GBP2P32456 591 aaPredicted RBP17.98■□□□□ 0.47
TRIM65-203ENST00000540812 USP41Q3LFD5 358 aa17.98■□□□□ 0.47
TRIM65-203ENST00000540812 POTEGQ6S5H5 508 aa17.98■□□□□ 0.47
TRIM65-203ENST00000540812 RIN2Q8WYP3 895 aaPredicted RBP17.98■□□□□ 0.47
TRIM65-203ENST00000540812 FZD8Q9H461 694 aa17.98■□□□□ 0.47
TRIM65-203ENST00000540812 TUFT1Q9NNX1 390 aa17.98■□□□□ 0.47
TRIM65-203ENST00000540812 PRMT7Q9NVM4 692 aaPredicted RBP17.98■□□□□ 0.47
TRIM65-203ENST00000540812 USP20Q9Y2K6 914 aa17.98■□□□□ 0.47
TRIM65-203ENST00000540812 ZMYM2Q9UBW7 1377 aa17.98■□□□□ 0.47
TRIM65-203ENST00000540812 PAPLNO95428 1278 aa17.97■□□□□ 0.47
TRIM65-203ENST00000540812 EDN1P05305 212 aa17.97■□□□□ 0.47
TRIM65-203ENST00000540812 RTP2Q5QGT7 225 aa17.97■□□□□ 0.47
TRIM65-203ENST00000540812 LILRA6Q6PI73 481 aa17.97■□□□□ 0.47
TRIM65-203ENST00000540812 ELMSAN1Q6PJG2 1045 aa17.97■□□□□ 0.47
TRIM65-203ENST00000540812 CYP26C1Q6V0L0 522 aa17.97■□□□□ 0.47
TRIM65-203ENST00000540812 MCPH1Q8NEM0 835 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms