RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 STK4Q13043 487 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 CLLU1OSQ5K130 101 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 CMTR2Q8IYT2 770 aaKnown RBP16.34■□□□□ 0.21
MDM1-210ENST00000540418 ABI1Q8IZP0 508 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 SYCP3Q8IZU3 236 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 SPATA20Q8TB22 786 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 RSPH1Q8WYR4 309 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 TIFAQ96CG3 184 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 CASD1Q96PB1 797 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 GSDMAQ96QA5 445 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 TMEM117Q9H0C3 514 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 PCDHA5Q9Y5H7 936 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 LCHNA4D1U4 455 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 MEIS3P2A8K0S8 358 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 CA3P07451 260 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 GATMP50440 423 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 SLFN12LQ6IEE8 588 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 GLB1LQ6UWU2 654 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 NKX2-4Q9H2Z4 354 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 RMND1Q9NWS8 449 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 ANKFY1Q9P2R3 1169 aa16.34■□□□□ 0.21
MDM1-210ENST00000540418 PTPRSQ13332 1948 aa16.33■□□□□ 0.21
MDM1-210ENST00000540418 TBKBP1A7MCY6 615 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 ANKRD63C9JTQ0 380 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 OFD1O75665 1012 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 MATR3P43243 847 aaKnown RBP eCLIP16.33■□□□□ 0.2
MDM1-210ENST00000540418 BTG3Q14201 252 aaPredicted RBP16.33■□□□□ 0.2
MDM1-210ENST00000540418 SLC39A4Q6P5W5 647 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 HELQQ8TDG4 1101 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 SCFD1Q8WVM8 642 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 SMARCE1Q969G3 411 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 LRCH3Q96II8 777 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 APOL6Q9BWW8 343 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 RSAD1Q9HA92 442 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 SLC28A3Q9HAS3 691 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 GIT1Q9Y2X7 761 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 STYXL1Q9Y6J8 313 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 LAMA2P24043 3122 aaKnown RBP16.33■□□□□ 0.2
MDM1-210ENST00000540418 UBE4BO95155 1302 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 AKAP5P24588 427 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 HOXD13P35453 343 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 NOLC1Q14978 699 aaKnown RBP eCLIP16.33■□□□□ 0.2
MDM1-210ENST00000540418 KIAA0895Q8NCT3 520 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 HAPLN2Q9GZV7 340 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 SNTG2Q9NY99 539 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 PARP2Q9UGN5 583 aa16.33■□□□□ 0.2
MDM1-210ENST00000540418 A0A0B4J269 797 aa16.32■□□□□ 0.2
MDM1-210ENST00000540418 GRM5P41594 1212 aa16.32■□□□□ 0.2
MDM1-210ENST00000540418 BMT2Q1RMZ1 405 aa16.32■□□□□ 0.2
MDM1-210ENST00000540418 PAN2Q504Q3 1202 aaKnown RBP16.32■□□□□ 0.2
MDM1-210ENST00000540418 FIBCD1Q8N539 461 aa16.32■□□□□ 0.2
MDM1-210ENST00000540418 ERCC4Q92889 916 aaPredicted RBP16.32■□□□□ 0.2
MDM1-210ENST00000540418 IKZF4Q9H2S9 585 aa16.32■□□□□ 0.2
MDM1-210ENST00000540418 LAMA3Q16787 3333 aa16.32■□□□□ 0.2
MDM1-210ENST00000540418 NOMO2Q5JPE7 1267 aa16.32■□□□□ 0.2
MDM1-210ENST00000540418 CCDC94Q9BW85 323 aaPredicted RBP16.32■□□□□ 0.2
MDM1-210ENST00000540418 LINC01553A4QN01 128 aa16.31■□□□□ 0.2
MDM1-210ENST00000540418 HARSP12081 509 aaKnown RBP16.31■□□□□ 0.2
MDM1-210ENST00000540418 MCM4P33991 863 aa16.31■□□□□ 0.2
MDM1-210ENST00000540418 TAP1Q03518 808 aa16.31■□□□□ 0.2
MDM1-210ENST00000540418 KYAT1Q16773 422 aa16.31■□□□□ 0.2
MDM1-210ENST00000540418 PPP2R2DQ66LE6 453 aa16.31■□□□□ 0.2
MDM1-210ENST00000540418 GPR153Q6NV75 609 aa16.31■□□□□ 0.2
MDM1-210ENST00000540418 THNSL1Q8IYQ7 743 aa16.31■□□□□ 0.2
MDM1-210ENST00000540418 KANSL3Q9P2N6 904 aa16.31■□□□□ 0.2
MDM1-210ENST00000540418 GDAQ9Y2T3 454 aa16.31■□□□□ 0.2
MDM1-210ENST00000540418 TRIOBPQ9H2D6 2365 aa16.31■□□□□ 0.2
MDM1-210ENST00000540418 TMEM265A0A087WTH1 108 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 ARL5CA6NH57 179 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 TISP43B9A030 160 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 INPPL1O15357 1258 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 ADSSP30520 456 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 CAMK4Q16566 473 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 KNOP1Q1ED39 458 aaKnown RBP16.3■□□□□ 0.2
MDM1-210ENST00000540418 NELFCDQ8IXH7 590 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 CEP120Q8N960 986 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 URGCPQ8TCY9 931 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 GPT2Q8TD30 523 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 ACAP3Q96P50 834 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 GAD1Q99259 594 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 MSTO1Q9BUK6 570 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 MRPL9Q9BYD2 267 aaKnown RBP16.3■□□□□ 0.2
MDM1-210ENST00000540418 GTPBP4Q9BZE4 634 aaKnown RBP16.3■□□□□ 0.2
MDM1-210ENST00000540418 GBP3Q9H0R5 595 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 INPP5FQ9Y2H2 1132 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 OGTO15294 1046 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 RECQL4O94761 1208 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 ARHGEF15O94989 841 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 OSTNP61366 133 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 SNRPFP62306 86 aaKnown RBP16.3■□□□□ 0.2
MDM1-210ENST00000540418 LRRC55Q6ZSA7 311 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 POMGNT1Q8WZA1 660 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 CLSTN2Q9H4D0 955 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 TYW1Q9NV66 732 aaKnown RBP16.3■□□□□ 0.2
MDM1-210ENST00000540418 KLK14Q9P0G3 267 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 MRPL42Q9Y6G3 142 aaKnown RBP16.3■□□□□ 0.2
MDM1-210ENST00000540418 ZMYM2Q9UBW7 1377 aa16.3■□□□□ 0.2
MDM1-210ENST00000540418 KIF20AO95235 890 aa16.29■□□□□ 0.2
MDM1-210ENST00000540418 GARTP22102 1010 aa16.29■□□□□ 0.2
MDM1-210ENST00000540418 MLH1P40692 756 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms