RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 PCDHA3Q9Y5H8 950 aa13.37□□□□□ -0.27
NEK6-213ENST00000540326 ZNF646O15015 1829 aaPredicted RBP13.37□□□□□ -0.27
NEK6-213ENST00000540326 C5orf60A6NFR6 353 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 CCDC169A6NNP5 214 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 RGS16O15492 202 aaPredicted RBP13.36□□□□□ -0.27
NEK6-213ENST00000540326 DRD4P21917 467 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 RASA3Q14644 834 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 CCDC25Q86WR0 208 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 FAM71AQ8IYT1 594 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 CPXCR1Q8N123 301 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 CHMP6Q96FZ7 201 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 RPS6KC1Q96S38 1066 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 KIFC3Q9BVG8 833 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.36□□□□□ -0.277e-7■■■■■ 33.1
NEK6-213ENST00000540326 SPDYE2BA6NHP3 402 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 PODXLO00592 558 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 PPIP5K2O43314 1243 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 CALCAP01258 141 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 SPDYE6P0CI01 402 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 RARAP10276 462 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 YWHABP31946 246 aaKnown RBP13.36□□□□□ -0.27
NEK6-213ENST00000540326 CDR1P51861 262 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 FMO1Q01740 532 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 UGCGQ16739 394 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 CD101Q93033 1021 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 ZNF653Q96CK0 615 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 PGM2Q96G03 612 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 TMEM39BQ9GZU3 492 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 CCDC113Q9H0I3 377 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 ADAM7Q9H2U9 754 aa13.36□□□□□ -0.27
NEK6-213ENST00000540326 MTRF1LQ9UGC7 380 aaKnown RBP13.36□□□□□ -0.27
NEK6-213ENST00000540326 P4HA2O15460 535 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 HSPA6P17066 643 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 COILP38432 576 aaPredicted RBP13.35□□□□□ -0.27
NEK6-213ENST00000540326 QARSP47897 775 aaKnown RBP13.35□□□□□ -0.27
NEK6-213ENST00000540326 SNRNP35Q16560 246 aaKnown RBP13.35□□□□□ -0.27
NEK6-213ENST00000540326 CCDC38Q502W7 563 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 ANKRD20A8PQ5CZ79 823 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 SLC13A5Q86YT5 568 aaPredicted RBP13.35□□□□□ -0.27
NEK6-213ENST00000540326 AKT1S1Q96B36 256 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 FAM129AQ9BZQ8 928 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 WNT8AQ9H1J5 351 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 TOPORSQ9NS56 1045 aaPredicted RBP13.35□□□□□ -0.27
NEK6-213ENST00000540326 SCAF8Q9UPN6 1271 aaKnown RBP13.35□□□□□ -0.27
NEK6-213ENST00000540326 RAD17O75943 681 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 DLATP10515 647 aaKnown RBP13.35□□□□□ -0.27
NEK6-213ENST00000540326 GZMAP12544 262 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 CYP11B1P15538 503 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 ADSSP30520 456 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 MMP13P45452 471 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 MRPS9P82933 396 aaKnown RBP13.35□□□□□ -0.27
NEK6-213ENST00000540326 GTF2BQ00403 316 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 TNIP1Q15025 636 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 TKFCQ3LXA3 575 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 FAM102BQ5T8I3 360 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 PLA2G4FQ68DD2 849 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 DHX38Q92620 1227 aaKnown RBP13.35□□□□□ -0.27
NEK6-213ENST00000540326 FAM84AQ96KN4 292 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 CEP89Q96ST8 783 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 MTFR1LQ9H019 292 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 SLC40A1Q9NP59 571 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 KLC4Q9NSK0 619 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 ZNF70Q9UC06 446 aaPredicted RBP13.35□□□□□ -0.27
NEK6-213ENST00000540326 DBR1Q9UK59 544 aaKnown RBP13.35□□□□□ -0.27
NEK6-213ENST00000540326 ZNF536O15090 1300 aa13.35□□□□□ -0.27
NEK6-213ENST00000540326 CLDN3O15551 220 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 RIPK2O43353 540 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 CAP2P40123 477 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 HSD17B4P51659 736 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 SMTNP53814 917 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 MTMR1Q13613 665 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 ALCAMQ13740 583 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 ARMC9Q7Z3E5 817 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 FAM160B2Q86V87 743 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 C12orf56Q8IXR9 622 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 FAM151AQ8WW52 585 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 SHC3Q92529 594 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 ZNF317Q96PQ6 595 aaPredicted RBP13.34□□□□□ -0.27
NEK6-213ENST00000540326 PRMT1Q99873 361 aaKnown RBP13.34□□□□□ -0.27
NEK6-213ENST00000540326 AGO4Q9HCK5 861 aaKnown RBP13.34□□□□□ -0.27
NEK6-213ENST00000540326 FEM1BQ9UK73 627 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 MTUS1Q9ULD2 1270 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 ZBTB12Q9Y330 459 aaPredicted RBP13.34□□□□□ -0.27
NEK6-213ENST00000540326 RASSF9O75901 435 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 IFNAR2P48551 515 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 MFAP3P55082 362 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 DRP2Q13474 957 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 DGKZQ13574 1117 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 SNX1Q13596 522 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 TCEAL1Q15170 157 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 DLGAP5Q15398 846 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 PPP1R7Q15435 360 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 SIX1Q15475 284 aaPredicted RBP13.34□□□□□ -0.27
NEK6-213ENST00000540326 PHLDB2Q86SQ0 1253 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 C1orf54Q8WWF1 131 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 ATXN2LQ8WWM7 1075 aaKnown RBP13.34□□□□□ -0.27
NEK6-213ENST00000540326 CD248Q9HCU0 757 aa13.34□□□□□ -0.27
NEK6-213ENST00000540326 ASTN2O75129 1339 aaPredicted RBP13.34□□□□□ -0.27
NEK6-213ENST00000540326 ICAM1P05362 532 aa13.33□□□□□ -0.27
NEK6-213ENST00000540326 MAPTP10636 758 aaKnown RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms