RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SMTNP53814 917 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 ERVFC1P60507 584 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 PLCB3Q01970 1234 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 RNASELQ05823 741 aaKnown RBP20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 E2F4Q16254 413 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 CSPP1Q1MSJ5 1256 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 TIGD5Q53EQ6 642 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 SV2BQ7L1I2 683 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 HAUS6Q7Z4H7 955 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 BCL7CQ8WUZ0 217 aaPredicted RBP20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 DDX12PQ92771 950 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 DNAJC19Q96DA6 116 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 ZBTB45Q96K62 511 aaPredicted RBP20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 ADPGKQ9BRR6 497 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 MRPL4Q9BYD3 311 aaKnown RBP20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 NSUN3Q9H649 340 aaKnown RBP20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 PARVGQ9HBI0 331 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 SNTG2Q9NY99 539 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 KANSL3Q9P2N6 904 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 PARP2Q9UGN5 583 aa20.11■□□□□ 0.81
SNRPA1-203ENST00000540017 ALDH7A1P49419 539 aaKnown RBP20.1■□□□□ 0.81
SNRPA1-203ENST00000540017 ADGRD2Q7Z7M1 963 aa20.1■□□□□ 0.81
SNRPA1-203ENST00000540017 HACE1Q8IYU2 909 aa20.1■□□□□ 0.81
SNRPA1-203ENST00000540017 CEP120Q8N960 986 aa20.1■□□□□ 0.81
SNRPA1-203ENST00000540017 LEO1Q8WVC0 666 aaPredicted RBP20.1■□□□□ 0.81
SNRPA1-203ENST00000540017 MRPS27Q92552 414 aaKnown RBP20.1■□□□□ 0.81
SNRPA1-203ENST00000540017 STAMQ92783 540 aa20.1■□□□□ 0.81
SNRPA1-203ENST00000540017 CDT1Q9H211 546 aa20.1■□□□□ 0.81
SNRPA1-203ENST00000540017 ZHX3Q9H4I2 956 aa20.1■□□□□ 0.81
SNRPA1-203ENST00000540017 SPTBN5Q9NRC6 3674 aaKnown RBP20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 TRAK2O60296 914 aa20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 TBCAO75347 108 aaKnown RBP20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 RECQL4O94761 1208 aa20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 PROZP22891 400 aa20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 NMT1P30419 496 aaKnown RBP20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 GTF2F1P35269 517 aaKnown RBP eCLIP20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 PPM1AP35813 382 aa20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 TFF2Q03403 129 aa20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 UBE3AQ05086 875 aa20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 DCAF4L1Q3SXM0 396 aa20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 ZBTB33Q86T24 672 aa20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 KCNN1Q92952 543 aa20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 THEGQ9P2T0 379 aa20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 KCNG1Q9UIX4 513 aa20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 GDAQ9Y2T3 454 aa20.09■□□□□ 0.81
SNRPA1-203ENST00000540017 K7ENM7 598 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 FSCN2O14926 492 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 DSC1Q08554 894 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 HYAL1Q12794 435 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 STRN3Q13033 797 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 ZNF568Q3ZCX4 644 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 RESP18Q5W5W9 173 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 SFR1Q86XK3 245 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 COLGALT2Q8IYK4 626 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 DHX58Q96C10 678 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 IGSF21Q96ID5 467 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 HAPLN2Q9GZV7 340 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 TLR9Q9NR96 1032 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 LZTS1Q9Y250 596 aa20.08■□□□□ 0.81
SNRPA1-203ENST00000540017 PTGESO14684 152 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 NRP1O14786 923 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 KRT85P78386 507 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 KRT17Q04695 432 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 ZC2HC1CQ53FD0 456 aaPredicted RBP20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 MPZL3Q6UWV2 235 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 FAM178BQ8IXR5 827 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 HLA-CQ95604 372 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 FAM193BQ96PV7 902 aaPredicted RBP20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 TMEM175Q9BSA9 504 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 VN1R3Q9BXE9 311 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 KBTBD4Q9NVX7 518 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 CACNG4Q9UBN1 327 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 TBX20Q9UMR3 447 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 TDRD15B5MCY1 1934 aaKnown RBP20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 ZMYM2Q9UBW7 1377 aa20.07■□□□□ 0.8
SNRPA1-203ENST00000540017 TCHHQ07283 1943 aa20.06■□□□□ 0.8
SNRPA1-203ENST00000540017 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.06■□□□□ 0.8
SNRPA1-203ENST00000540017 F8W810 466 aa20.06■□□□□ 0.8
SNRPA1-203ENST00000540017 POLR2DO15514 142 aaKnown RBP20.06■□□□□ 0.8
SNRPA1-203ENST00000540017 OSTNP61366 133 aa20.06■□□□□ 0.8
SNRPA1-203ENST00000540017 COL19A1Q14993 1142 aa20.06■□□□□ 0.8
SNRPA1-203ENST00000540017 MICAL1Q8TDZ2 1067 aa20.06■□□□□ 0.8
SNRPA1-203ENST00000540017 SPATA32Q96LK8 384 aa20.06■□□□□ 0.8
SNRPA1-203ENST00000540017 TCHPQ9BT92 498 aa20.06■□□□□ 0.8
SNRPA1-203ENST00000540017 PUF60Q9UHX1 559 aaKnown RBP20.06■□□□□ 0.8
SNRPA1-203ENST00000540017 FAN1Q9Y2M0 1017 aa20.06■□□□□ 0.8
SNRPA1-203ENST00000540017 H0YCG3 227 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 MEFVO15553 781 aaPredicted RBP20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 TOM1L1O75674 476 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 ALDH2P05091 517 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 MCF2P10911 925 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 GRM5P41594 1212 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 GTF2BQ00403 316 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 GRIK3Q13003 919 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 NAB2Q15742 525 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 SEZ6Q53EL9 994 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 PLPP4Q5VZY2 271 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 ZPBP2Q6X784 338 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 ZNF720Q7Z2F6 126 aa20.05■□□□□ 0.8
SNRPA1-203ENST00000540017 RBM23Q86U06 439 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms