RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PDXKO00764 312 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 CHUKO15111 745 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 PLEKP08567 350 aaPredicted RBP10.7□□□□□ -0.7
TRAF1-202ENST00000540010 DYNLT1P63172 113 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 CUL1Q13616 776 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 LRRC14Q15048 493 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 GLE1Q53GS7 698 aaKnown RBP10.7□□□□□ -0.7
TRAF1-202ENST00000540010 ARHGAP24Q8N264 748 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.7□□□□□ -0.7
TRAF1-202ENST00000540010 RAB3IL1Q8TBN0 382 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 GRK7Q8WTQ7 553 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 DNAJC7Q99615 494 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 ELP3Q9H9T3 547 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 ANKFY1Q9P2R3 1169 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 ANAPC5Q9UJX4 755 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 LRRIQ4A6NIV6 560 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 H0Y3Z8 333 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 IL9RQ01113 521 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 TRIM65Q6PJ69 517 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 GLYCTKQ8IVS8 523 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 RBM46Q8TBY0 533 aaKnown RBP10.7□□□□□ -0.7
TRAF1-202ENST00000540010 FBXL5Q9UKA1 691 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 CARSP49589 748 aaKnown RBP10.7□□□□□ -0.7
TRAF1-202ENST00000540010 MXI1P50539 228 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 IRAK1P51617 712 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 HIRAP54198 1017 aaPredicted RBP10.7□□□□□ -0.7
TRAF1-202ENST00000540010 KRT76Q01546 638 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 RCN2Q14257 317 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 GEN1Q17RS7 908 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 LGSNQ5TDP6 509 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 NLRP14Q86W24 1093 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 SPATA24Q86W54 205 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 DEPTORQ8TB45 409 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 RAB3IPQ96QF0 476 aaPredicted RBP10.7□□□□□ -0.7
TRAF1-202ENST00000540010 HEMGNQ9BXL5 484 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 SEL1LQ9UBV2 794 aa10.7□□□□□ -0.7
TRAF1-202ENST00000540010 CA4P22748 312 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 JAK3P52333 1124 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 MRPS9P82933 396 aaKnown RBP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 C9orf131Q5VYM1 1079 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 PAXIP1Q6ZW49 1069 aaPredicted RBP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 DDX42Q86XP3 938 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 ZNF408Q9H9D4 720 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 RBM12Q9NTZ6 932 aaKnown RBP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 UBIAD1Q9Y5Z9 338 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 H3BQF6 201 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 SGK1O00141 431 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 YWHABP31946 246 aaKnown RBP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 YWHAGP61981 247 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 VGLL4Q14135 290 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 HP1BP3Q5SSJ5 553 aaPredicted RBP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 RASIP1Q5U651 963 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 C1orf186Q6ZWK4 172 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 NIPA1Q7RTP0 329 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 SAMD3Q8N6K7 520 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 TAF1DQ9H5J8 278 aaPredicted RBP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 HPCAL4Q9UM19 191 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 A0A0U1RQJ8 604 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 NKRFO15226 690 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 SART1O43290 800 aaKnown RBP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 PPP1R37O75864 691 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 MUTP22033 750 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 KCNA1Q09470 495 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 ITGB3BPQ13352 177 aaPredicted RBP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 GLG1Q92896 1179 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 ATP6V1G3Q96LB4 118 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 LACRTQ9GZZ8 138 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 KCTD10Q9H3F6 313 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 CNOT10Q9H9A5 744 aaKnown RBP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 ACTR5Q9H9F9 607 aaPredicted RBP10.69□□□□□ -0.7
TRAF1-202ENST00000540010 ZNF112Q9UJU3 913 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 MAD1L1Q9Y6D9 718 aa10.69□□□□□ -0.7
TRAF1-202ENST00000540010 GOLGA8SH3BPF8 625 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 NOP56O00567 594 aaKnown RBP10.68□□□□□ -0.7
TRAF1-202ENST00000540010 SFNP31947 248 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 GCLMP48507 274 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 MFAP3P55082 362 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 PSMC5P62195 406 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 TMEM132BQ14DG7 1078 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 PPP2R5AQ15172 486 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 GPR162Q16538 588 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 CDHR1Q96JP9 859 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 BCAS3Q9H6U6 928 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 KCND2Q9NZV8 630 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 TPX2Q9ULW0 747 aaKnown RBP10.68□□□□□ -0.7
TRAF1-202ENST00000540010 L1RE1Q9UN81 338 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 PCDHA2Q9Y5H9 948 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 A0A1W2PQJ5 194 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 DKC1O60832 514 aaKnown RBP eCLIP10.68□□□□□ -0.7
TRAF1-202ENST00000540010 ZCWPW2Q504Y3 356 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 C10orf76Q5T2E6 689 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 CATSPERGQ6ZRH7 1159 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 ARMC9Q7Z3E5 817 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 SRRM1Q8IYB3 904 aaKnown RBP10.68□□□□□ -0.7
TRAF1-202ENST00000540010 CEP170P1Q96L14 293 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 VCX3BQ9H321 246 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 OLFML3Q9NRN5 406 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 INTUQ9ULD6 942 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 EXOC1LA0A1B0GW35 172 aa10.68□□□□□ -0.7
TRAF1-202ENST00000540010 LRRIQ3A6PVS8 624 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms