RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 HNRNPH2P55795 449 aaKnown RBP13.54□□□□□ -0.24
CACNB4-210ENST00000539935 ROR1Q01973 937 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 ZNF589Q86UQ0 364 aaPredicted RBP13.54□□□□□ -0.24
CACNB4-210ENST00000539935 OR6P1Q8NGX9 317 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 MYO1CO00159 1063 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 ZNF197O14709 1029 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 EIF2S1P05198 315 aaKnown RBP13.54□□□□□ -0.24
CACNB4-210ENST00000539935 CHRNA3P32297 505 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 DYNLL1P63167 89 aaKnown RBP13.54□□□□□ -0.24
CACNB4-210ENST00000539935 RESP18Q5W5W9 173 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 ICE2Q659A1 982 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 ZNF513Q8N8E2 541 aaPredicted RBP13.54□□□□□ -0.24
CACNB4-210ENST00000539935 BEST2Q8NFU1 509 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 OSBPL1AQ9BXW6 950 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 NDFIP2Q9NV92 336 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 DDX56Q9NY93 547 aaKnown RBP13.54□□□□□ -0.24
CACNB4-210ENST00000539935 LOC102724428A0A0B4J2F2 783 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 HNRNPRO43390 633 aaKnown RBP13.54□□□□□ -0.24
CACNB4-210ENST00000539935 LIFRP42702 1097 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 SIK1P57059 783 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 THEMIS2Q5TEJ8 643 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 URGCPQ8TCY9 931 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 CCT7Q99832 543 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 BFARQ9NZS9 450 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 KRT6AP02538 564 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 KRT6BP04259 564 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 BRAFP15056 766 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 CDH2P19022 906 aaPredicted RBP13.54□□□□□ -0.24
CACNB4-210ENST00000539935 EIF2AK2P19525 551 aaKnown RBP13.54□□□□□ -0.24
CACNB4-210ENST00000539935 MLH1P40692 756 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 KRT6CP48668 564 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 HSPA2P54652 639 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 ABCE1P61221 599 aaKnown RBP13.54□□□□□ -0.24
CACNB4-210ENST00000539935 MTMR1Q13613 665 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 TWF2Q6IBS0 349 aaKnown RBP13.54□□□□□ -0.24
CACNB4-210ENST00000539935 MFN1Q8IWA4 741 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 TTC39CQ8N584 583 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 WNT8AQ9H1J5 351 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 CAPN1P07384 714 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 TRADDQ15628 312 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 PLEKHA8Q96JA3 519 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 AURKCQ9UQB9 309 aa13.54□□□□□ -0.24
CACNB4-210ENST00000539935 NR3C1P04150 777 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 TYK2P29597 1187 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 CRKLP46109 303 aaKnown RBP13.53□□□□□ -0.24
CACNB4-210ENST00000539935 LRRC74AQ0VAA2 488 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 NFX1Q12986 1120 aaKnown RBP13.53□□□□□ -0.24
CACNB4-210ENST00000539935 INPP5AQ14642 412 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 CNGA2Q16280 664 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 ZNF568Q3ZCX4 644 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 CNPY4Q8N129 248 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 ZNF564Q8TBZ8 553 aaPredicted RBP13.53□□□□□ -0.24
CACNB4-210ENST00000539935 KCNV2Q8TDN2 545 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 MLXIPLQ9NP71 852 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 HPS4Q9NQG7 708 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 SLC9A2Q9UBY0 812 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 SERPINB4P48594 390 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 RAD23BP54727 409 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 AP3B2Q13367 1082 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 EFHBQ8N7U6 833 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 OSBPL9Q96SU4 736 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 PDCD10Q9BUL8 212 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 BRIP1Q9BX63 1249 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 TP53BP2Q13625 1128 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 MAPRE1Q15691 268 aaKnown RBP13.53□□□□□ -0.24
CACNB4-210ENST00000539935 PIGOQ8TEQ8 1089 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 TAF1DQ9H5J8 278 aaPredicted RBP13.53□□□□□ -0.24
CACNB4-210ENST00000539935 SYNDIG1Q9H7V2 258 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 ANGPT2O15123 496 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 MYBL1P10243 752 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 KCNA2P16389 499 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 MKRN3Q13064 507 aaKnown RBP13.53□□□□□ -0.24
CACNB4-210ENST00000539935 IYDQ6PHW0 289 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 PARP9Q8IXQ6 854 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 SAMD9LQ8IVG5 1584 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 UBA6A0AVT1 1052 aaPredicted RBP13.53□□□□□ -0.24
CACNB4-210ENST00000539935 GGPS1O95749 300 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 MRPS35P82673 323 aaKnown RBP13.53□□□□□ -0.24
CACNB4-210ENST00000539935 HIC1Q14526 733 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 TRIM63Q969Q1 353 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 OMA1Q96E52 524 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 ZC3H7BQ9UGR2 993 aaKnown RBP13.53□□□□□ -0.24
CACNB4-210ENST00000539935 FAM32AQ9Y421 112 aaKnown RBP13.53□□□□□ -0.24
CACNB4-210ENST00000539935 DENND3A2RUS2 1198 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 LGALS16A8MUM7 142 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 TRIM13O60858 407 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 IL6STP40189 918 aaPredicted RBP13.53□□□□□ -0.24
CACNB4-210ENST00000539935 TERF2Q15554 542 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 EFHC2Q5JST6 749 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 TRIM72Q6ZMU5 477 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 STAG2Q8N3U4 1231 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 DIS3LQ8TF46 1054 aaKnown RBP13.53□□□□□ -0.24
CACNB4-210ENST00000539935 BBS2Q9BXC9 721 aa13.53□□□□□ -0.24
CACNB4-210ENST00000539935 SCFD1Q8WVM8 642 aa13.52□□□□□ -0.24
CACNB4-210ENST00000539935 SFI1A8K8P3 1242 aa13.52□□□□□ -0.24
CACNB4-210ENST00000539935 TK2O00142 265 aa13.52□□□□□ -0.24
CACNB4-210ENST00000539935 TBC1D4O60343 1298 aa13.52□□□□□ -0.24
CACNB4-210ENST00000539935 S100A9P06702 114 aaKnown RBP13.52□□□□□ -0.24
CACNB4-210ENST00000539935 GPC3P51654 580 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms