RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 SEZ6LQ9BYH1 1024 aa17.61■□□□□ 0.41
TRAF3-204ENST00000539721 GOLGA6L6A8MZA4 724 aa17.6■□□□□ 0.41
TRAF3-204ENST00000539721 ABLIM1O14639 778 aa17.6■□□□□ 0.41
TRAF3-204ENST00000539721 AFPP02771 609 aaKnown RBP17.6■□□□□ 0.41
TRAF3-204ENST00000539721 CTSHP09668 335 aa17.6■□□□□ 0.41
TRAF3-204ENST00000539721 ARF4P18085 180 aaPredicted RBP17.6■□□□□ 0.41
TRAF3-204ENST00000539721 THPOP40225 353 aa17.6■□□□□ 0.41
TRAF3-204ENST00000539721 PBX1P40424 430 aa17.6■□□□□ 0.41
TRAF3-204ENST00000539721 MCL1Q07820 350 aa17.6■□□□□ 0.41
TRAF3-204ENST00000539721 NCBP1Q09161 790 aaKnown RBP17.6■□□□□ 0.41
TRAF3-204ENST00000539721 PCBP1Q15365 356 aaKnown RBP eCLIP17.6■□□□□ 0.41
TRAF3-204ENST00000539721 EEF1DP3Q658K8 133 aa17.6■□□□□ 0.41
TRAF3-204ENST00000539721 CDR2LQ86X02 465 aaPredicted RBP17.6■□□□□ 0.41
TRAF3-204ENST00000539721 TMEM40Q8WWA1 233 aa17.6■□□□□ 0.41
TRAF3-204ENST00000539721 SLC35C1Q96A29 364 aa17.6■□□□□ 0.41
TRAF3-204ENST00000539721 CRISPLD2Q9H0B8 497 aa17.6■□□□□ 0.41
TRAF3-204ENST00000539721 PDZD7Q9H5P4 517 aa17.6■□□□□ 0.41
TRAF3-204ENST00000539721 PTPRHQ9HD43 1115 aa17.6■□□□□ 0.41
TRAF3-204ENST00000539721 ZNF233A6NK53 670 aa17.59■□□□□ 0.41
TRAF3-204ENST00000539721 TULP1O00294 542 aaPredicted RBP17.59■□□□□ 0.41
TRAF3-204ENST00000539721 B4GALT4O60513 344 aa17.59■□□□□ 0.41
TRAF3-204ENST00000539721 ACOT2P49753 483 aa17.59■□□□□ 0.41
TRAF3-204ENST00000539721 VAMP7P51809 220 aa17.59■□□□□ 0.41
TRAF3-204ENST00000539721 SPECC1LQ69YQ0 1117 aa17.59■□□□□ 0.41
TRAF3-204ENST00000539721 TRPV6Q9H1D0 765 aa17.59■□□□□ 0.41
TRAF3-204ENST00000539721 A0A1W2PQC6 194 aa17.58■□□□□ 0.41
TRAF3-204ENST00000539721 OGTO15294 1046 aa17.58■□□□□ 0.41
TRAF3-204ENST00000539721 TRIM49P0CI25 452 aa17.58■□□□□ 0.41
TRAF3-204ENST00000539721 TRIM49CP0CI26 452 aa17.58■□□□□ 0.41
TRAF3-204ENST00000539721 CYP24A1Q07973 514 aa17.58■□□□□ 0.41
TRAF3-204ENST00000539721 DHX38Q92620 1227 aaKnown RBP17.58■□□□□ 0.41
TRAF3-204ENST00000539721 MFSD14AQ96MC6 490 aa17.58■□□□□ 0.41
TRAF3-204ENST00000539721 SENP6Q9GZR1 1112 aaPredicted RBP17.58■□□□□ 0.41
TRAF3-204ENST00000539721 CDT1Q9H211 546 aa17.58■□□□□ 0.41
TRAF3-204ENST00000539721 IMPACTQ9P2X3 320 aa17.58■□□□□ 0.41
TRAF3-204ENST00000539721 ITIH6Q6UXX5 1313 aa17.58■□□□□ 0.4
TRAF3-204ENST00000539721 MGAT3Q09327 533 aa17.58■□□□□ 0.4
TRAF3-204ENST00000539721 SYCP1Q15431 976 aa17.58■□□□□ 0.4
TRAF3-204ENST00000539721 SEZ6Q53EL9 994 aa17.58■□□□□ 0.4
TRAF3-204ENST00000539721 ZBTB41Q5SVQ8 909 aa17.58■□□□□ 0.4
TRAF3-204ENST00000539721 PCMTD1Q96MG8 357 aaPredicted RBP17.58■□□□□ 0.4
TRAF3-204ENST00000539721 ERGIC2Q96RQ1 377 aa17.58■□□□□ 0.4
TRAF3-204ENST00000539721 ADPGKQ9BRR6 497 aa17.58■□□□□ 0.4
TRAF3-204ENST00000539721 A0A1B0GUA9 196 aa17.57■□□□□ 0.4
TRAF3-204ENST00000539721 CHRNA1P02708 482 aa17.57■□□□□ 0.4
TRAF3-204ENST00000539721 MCF2P10911 925 aa17.57■□□□□ 0.4
TRAF3-204ENST00000539721 AXLP30530 894 aa17.57■□□□□ 0.4
TRAF3-204ENST00000539721 CDK7P50613 346 aa17.57■□□□□ 0.4
TRAF3-204ENST00000539721 DLG4P78352 724 aa17.57■□□□□ 0.4
TRAF3-204ENST00000539721 TRIM71Q2Q1W2 868 aaKnown RBP17.57■□□□□ 0.4
TRAF3-204ENST00000539721 CRELD2Q6UXH1 353 aaPredicted RBP17.57■□□□□ 0.4
TRAF3-204ENST00000539721 USP37Q86T82 979 aa17.57■□□□□ 0.4
TRAF3-204ENST00000539721 THNSL1Q8IYQ7 743 aa17.57■□□□□ 0.4
TRAF3-204ENST00000539721 CCDC155Q8N6L0 562 aa17.57■□□□□ 0.4
TRAF3-204ENST00000539721 PLEKHO2Q8TD55 490 aa17.57■□□□□ 0.4
TRAF3-204ENST00000539721 CCDC127Q96BQ5 260 aa17.57■□□□□ 0.4
TRAF3-204ENST00000539721 MMRN2Q9H8L6 949 aa17.57■□□□□ 0.4
TRAF3-204ENST00000539721 RBAKQ9NYW8 714 aaPredicted RBP17.57■□□□□ 0.4
TRAF3-204ENST00000539721 NOC2LQ9Y3T9 749 aaKnown RBP17.57■□□□□ 0.4
TRAF3-204ENST00000539721 FAM189A1O60320 539 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 CAND2O75155 1236 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 TNFSF9P41273 254 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 NOTUMQ6P988 496 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 APBB1IPQ7Z5R6 666 aaPredicted RBP17.56■□□□□ 0.4
TRAF3-204ENST00000539721 FAM228AQ86W67 206 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 TMC2Q8TDI7 906 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 PARD3BQ8TEW8 1205 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 AGPAT5Q9NUQ2 364 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 PIN4Q9Y237 131 aaKnown RBP17.56■□□□□ 0.4
TRAF3-204ENST00000539721 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.56■□□□□ 0.43e-7■■■□□ 14.7
TRAF3-204ENST00000539721 RPS6KA5O75582 802 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 HOXA11P31270 313 aaPredicted RBP17.56■□□□□ 0.4
TRAF3-204ENST00000539721 GJA8P48165 433 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 FMO5P49326 533 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 ENPEPQ07075 957 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 PSMD6Q15008 389 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 DCAF4L1Q3SXM0 396 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 CCDC186Q7Z3E2 898 aa17.56■□□□□ 0.4
TRAF3-204ENST00000539721 CPSF3Q9UKF6 684 aaKnown RBP17.56■□□□□ 0.4
TRAF3-204ENST00000539721 LRRIQ3A6PVS8 624 aaPredicted RBP17.55■□□□□ 0.4
TRAF3-204ENST00000539721 STX10O60499 249 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 NPTXRO95502 500 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 DLATP10515 647 aaKnown RBP17.55■□□□□ 0.4
TRAF3-204ENST00000539721 KLK7P49862 253 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 MNX1P50219 401 aaPredicted RBP17.55■□□□□ 0.4
TRAF3-204ENST00000539721 MCCD1P59942 119 aaPredicted RBP17.55■□□□□ 0.4
TRAF3-204ENST00000539721 OSTNP61366 133 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 FAM26DQ5JW98 314 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 C1orf220Q5T0J3 134 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 ZNF618Q5T7W0 954 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 SLC27A1Q6PCB7 646 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 PPFIBP1Q86W92 1011 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 BRSK2Q8IWQ3 736 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 FAM126BQ8IXS8 530 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 CEP120Q8N960 986 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 FNBP1Q96RU3 617 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 SIK3Q9Y2K2 1263 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 BRCA2P51587 3418 aa17.55■□□□□ 0.4
TRAF3-204ENST00000539721 MROH7Q68CQ1 1323 aa17.54■□□□□ 0.4
TRAF3-204ENST00000539721 N4BP1O75113 896 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms