RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 FAM228AQ86W67 206 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 CEP57Q86XR8 500 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 BBOF1Q8ND07 529 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 ZNF564Q8TBZ8 553 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-209ENST00000539584 EPS8L1Q8TE68 723 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 KIFAP3Q92845 792 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 DEFB129Q9H1M3 183 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 VEZTQ9HBM0 779 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 NOCTQ9UK39 431 aaKnown RBP14.22□□□□□ -0.13
UBE3B-209ENST00000539584 SERPINA10Q9UK55 444 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 DBR1Q9UK59 544 aaKnown RBP14.22□□□□□ -0.13
UBE3B-209ENST00000539584 HIP1RO75146 1068 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 SIX1Q15475 284 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-209ENST00000539584 USP37Q86T82 979 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 EXOC3L1Q86VI1 746 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 SLC20A1Q8WUM9 679 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 GRAMD1AQ96CP6 724 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 IFT74Q96LB3 600 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 SCLT1Q96NL6 688 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 ELAC2Q9BQ52 826 aaKnown RBP14.22□□□□□ -0.13
UBE3B-209ENST00000539584 LXNQ9BS40 222 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 BCAS3Q9H6U6 928 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 NOD2Q9HC29 1040 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 ARHGEF10LQ9HCE6 1279 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 LRRC4CQ9HCJ2 640 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 ACTL7BQ9Y614 415 aa14.22□□□□□ -0.13
UBE3B-209ENST00000539584 SIPA1L1O43166 1804 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 LOC102724159A0A0B4J2E5 919 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 K7ENM7 598 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 BACH1O14867 736 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 CHMP2AO43633 222 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 RARAP10276 462 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 SLC1A1P43005 524 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 MXI1P50539 228 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 RASA3Q14644 834 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 TNIP1Q15025 636 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 PWP2Q15269 919 aaKnown RBP14.21□□□□□ -0.13
UBE3B-209ENST00000539584 NIPA1Q7RTP0 329 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 CHURC1Q8WUH1 139 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 DYDC1Q8WWB3 177 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 SHC3Q92529 594 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 FOXP3Q9BZS1 431 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 UNC45AQ9H3U1 944 aa14.21□□□□□ -0.13
UBE3B-209ENST00000539584 UBAP1LF5GYI3 381 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 LYPLA2O95372 231 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 GAS8O95995 478 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 CFBP00751 764 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 P4HBP07237 508 aaKnown RBP14.2□□□□□ -0.14
UBE3B-209ENST00000539584 PLS3P13797 630 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 FGFR4P22455 802 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 SKIV2L2P42285 1042 aaKnown RBP14.2□□□□□ -0.14
UBE3B-209ENST00000539584 GTF2BQ00403 316 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 PPP3CAQ08209 521 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 GALNTL6Q49A17 601 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 RHBDF2Q6PJF5 856 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 PADI6Q6TGC4 694 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 RNF207Q6ZRF8 634 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.2□□□□□ -0.14
UBE3B-209ENST00000539584 ENOSF1Q7L5Y1 443 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 SH3BP5LQ7L8J4 393 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 RELL1Q8IUW5 271 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 ARHGEF19Q8IW93 802 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 ZDHHC14Q8IZN3 488 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 DAW1Q8N136 415 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 EPS8L3Q8TE67 593 aaKnown RBP14.2□□□□□ -0.14
UBE3B-209ENST00000539584 ARHGEF2Q92974 986 aaKnown RBP14.2□□□□□ -0.14
UBE3B-209ENST00000539584 NUP85Q9BW27 656 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 DONSONQ9NYP3 566 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 HERC5Q9UII4 1024 aaKnown RBP14.2□□□□□ -0.14
UBE3B-209ENST00000539584 COQ4Q9Y3A0 265 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 IPO5O00410 1097 aaKnown RBP14.2□□□□□ -0.14
UBE3B-209ENST00000539584 TTC4O95801 387 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 ALADP13716 330 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 CHRNB2P17787 502 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 GTF2H1P32780 548 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 SLC8A3P57103 927 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 SNAP25P60880 206 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 CDR2Q01850 454 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 TCP10Q12799 353 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 CRYMQ14894 314 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 ARHGEF18Q6ZSZ5 1173 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 KSR1Q8IVT5 923 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 RIBC1Q8N443 379 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-209ENST00000539584 TRIM11Q96F44 468 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 SNF8Q96H20 258 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 IKZF4Q9H2S9 585 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 RANBP17Q9H2T7 1088 aaKnown RBP14.2□□□□□ -0.14
UBE3B-209ENST00000539584 CDC42EP4Q9H3Q1 356 aaKnown RBP14.2□□□□□ -0.14
UBE3B-209ENST00000539584 EBF2Q9HAK2 575 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 EXOC7Q9UPT5 735 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 ARL2BPQ9Y2Y0 163 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.2□□□□□ -0.14
UBE3B-209ENST00000539584 UBR3Q6ZT12 1888 aa14.2□□□□□ -0.14
UBE3B-209ENST00000539584 GJB6O95452 261 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 MYBL1P10243 752 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 MARCKSL1P49006 195 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 PTK6Q13882 451 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 RRP1BQ14684 758 aaKnown RBP14.19□□□□□ -0.14
UBE3B-209ENST00000539584 DOK7Q18PE1 504 aa14.19□□□□□ -0.14
UBE3B-209ENST00000539584 SGO2Q562F6 1265 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms