RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 EIF3DO15371 548 aaKnown RBP eCLIP14.24□□□□□ -0.13
CCDC42-202ENST00000539522 DGKIO75912 1065 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 GJB5O95377 273 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 WNT7BP56706 349 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 MCL1Q07820 350 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 PSMD2Q13200 908 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 FAM117BQ6P1L5 589 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 CRELD2Q6UXH1 353 aaPredicted RBP14.24□□□□□ -0.13
CCDC42-202ENST00000539522 LRRC55Q6ZSA7 311 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 ZBTB33Q86T24 672 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 MYOCDQ8IZQ8 938 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 TMEM130Q8N3G9 435 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 CCDC51Q96ER9 411 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 GSDMAQ96QA5 445 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 MED15Q96RN5 788 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 ELAC1Q9H777 363 aaKnown RBP14.24□□□□□ -0.13
CCDC42-202ENST00000539522 C1orf112Q9NSG2 853 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 EXOC1Q9NV70 894 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 TMEM161AQ9NX61 479 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 MIOSQ9NXC5 875 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 KIAA1468Q9P260 1216 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 MAPK8IP1Q9UQF2 711 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 TRIOBPQ9H2D6 2365 aa14.24□□□□□ -0.13
CCDC42-202ENST00000539522 H0YCG3 227 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 BIN1O00499 593 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 N4BP3O15049 544 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 EFCAB14O75071 495 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 TOM1L1O75674 476 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 UPP2O95045 317 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 AMHP03971 560 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 ATP2A2P16615 1042 aaKnown RBP14.23□□□□□ -0.13
CCDC42-202ENST00000539522 ZSCAN20P17040 1043 aaPredicted RBP14.23□□□□□ -0.13
CCDC42-202ENST00000539522 AKAP5P24588 427 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 TNFSF9P41273 254 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 PRCPP42785 496 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 PMS1P54277 932 aaKnown RBP14.23□□□□□ -0.13
CCDC42-202ENST00000539522 ZCWPW2Q504Y3 356 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 LRSAM1Q6UWE0 723 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 MPZL3Q6UWV2 235 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 NPAS4Q8IUM7 802 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 NELFCDQ8IXH7 590 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 PHOSPHO2Q8TCD6 241 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
CCDC42-202ENST00000539522 SMARCE1Q969G3 411 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 CASD1Q96PB1 797 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 ACCSQ96QU6 501 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 SLC9A7Q96T83 725 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 CBWD1Q9BRT8 395 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 PBX4Q9BYU1 374 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 SEMA6BQ9H3T3 888 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 SNTG2Q9NY99 539 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 KCNG1Q9UIX4 513 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 CITO14578 2027 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 TDRD15B5MCY1 1934 aaKnown RBP14.23□□□□□ -0.13
CCDC42-202ENST00000539522 ATG2AQ2TAZ0 1938 aa14.23□□□□□ -0.13
CCDC42-202ENST00000539522 PPP1R3GB7ZBB8 358 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 HNRNPDLO14979 420 aaKnown RBP14.22□□□□□ -0.13
CCDC42-202ENST00000539522 INPPL1O15357 1258 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 OFD1O75665 1012 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 IBSPP21815 317 aaPredicted RBP14.22□□□□□ -0.13
CCDC42-202ENST00000539522 SCP2P22307 547 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 STRN3Q13033 797 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 LRIT3Q3SXY7 679 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 ZNF568Q3ZCX4 644 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 COBLL1Q53SF7 1204 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 ZNF658Q5TYW1 1059 aaPredicted RBP14.22□□□□□ -0.13
CCDC42-202ENST00000539522 FAM43BQ6ZT52 329 aaPredicted RBP14.22□□□□□ -0.13
CCDC42-202ENST00000539522 SLC17A8Q8NDX2 589 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 ZFP42Q96MM3 310 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 ANKFY1Q9P2R3 1169 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 PLAGL2Q9UPG8 496 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 PCDHB13Q9Y5F0 798 aa14.22□□□□□ -0.13
CCDC42-202ENST00000539522 UBE4BO95155 1302 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 A0A1W2PPC1 479 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 PTGESO14684 152 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 EOMESO95936 686 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 MCF2P10911 925 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 GRM5P41594 1212 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 KCNJ6P48051 423 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 LIG4P49917 911 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 ALCAMQ13740 583 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 NOLC1Q14978 699 aaKnown RBP eCLIP14.21□□□□□ -0.13
CCDC42-202ENST00000539522 NAB2Q15742 525 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 KNOP1Q1ED39 458 aaKnown RBP14.21□□□□□ -0.13
CCDC42-202ENST00000539522 XKR4Q5GH76 650 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 SASS6Q6UVJ0 657 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 ALKAL1Q6UXT8 129 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 ADSSL1Q8N142 457 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 HELQQ8TDG4 1101 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 AGPAT3Q9NRZ7 376 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 KLK14Q9P0G3 267 aa14.21□□□□□ -0.13
CCDC42-202ENST00000539522 PLXNA4Q9HCM2 1894 aa14.21□□□□□ -0.14
CCDC42-202ENST00000539522 COL4A4P53420 1690 aaPredicted RBP14.2□□□□□ -0.14
CCDC42-202ENST00000539522 RECQL4O94761 1208 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 SMC2O95347 1197 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 ADRB2P07550 413 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 CCDC192P0DO97 292 aa14.2□□□□□ -0.14
CCDC42-202ENST00000539522 HARSP12081 509 aaKnown RBP14.2□□□□□ -0.14
CCDC42-202ENST00000539522 IGFBP6P24592 240 aaPredicted RBP14.2□□□□□ -0.14
CCDC42-202ENST00000539522 RAB27AP51159 221 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms