RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 PEX11AO75192 247 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 DCTN3O75935 186 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 ECEL1O95672 775 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 VCAM1P19320 739 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 CTNNA2P26232 953 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 MAPK1P28482 360 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 CDKN1CP49918 316 aaPredicted RBP9.66□□□□□ -0.86
SNHG1-209ENST00000538654 CALCOCO2Q13137 446 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 MRPL58Q14197 206 aaKnown RBP9.66□□□□□ -0.86
SNHG1-209ENST00000538654 SLC35G1Q2M3R5 365 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 CCDC92Q53HC0 331 aaPredicted RBP9.66□□□□□ -0.86
SNHG1-209ENST00000538654 HERC4Q5GLZ8 1057 aaPredicted RBP9.66□□□□□ -0.86
SNHG1-209ENST00000538654 TMEM154Q6P9G4 183 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 RBBP8NLQ8NC74 664 aaPredicted RBP9.66□□□□□ -0.86
SNHG1-209ENST00000538654 SLC30A5Q8TAD4 765 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 SCFD1Q8WVM8 642 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 NSUN4Q96CB9 384 aaKnown RBP9.66□□□□□ -0.86
SNHG1-209ENST00000538654 MKNK2Q9HBH9 465 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 ERVK-5Q9HDB9 667 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 MTUS1Q9ULD2 1270 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 PCDHA2Q9Y5H9 948 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 MAST2Q6P0Q8 1798 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 SCN7AQ01118 1682 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.66□□□□□ -0.86
SNHG1-209ENST00000538654 TOGARAM1Q9Y4F4 1720 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 POTEMA6NI47 508 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 H3BRB1 525 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 CALUO43852 315 aaPredicted RBP9.66□□□□□ -0.86
SNHG1-209ENST00000538654 TSPY3P0CV98 308 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 TSPY8P0CW00 308 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 CYP2D6P10635 497 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 HSD3B2P26439 372 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 RXRBP28702 533 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 GYG1P46976 350 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 HADHBP55084 474 aaKnown RBP9.66□□□□□ -0.86
SNHG1-209ENST00000538654 NFX1Q12986 1120 aaKnown RBP9.66□□□□□ -0.86
SNHG1-209ENST00000538654 LAMB3Q13751 1172 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 EPHA7Q15375 998 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 HYIQ5T013 277 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 VSTM1Q6UX27 236 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 RHOT2Q8IXI1 618 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 RMDN2Q96LZ7 410 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 TUT1Q9H6E5 874 aaKnown RBP9.66□□□□□ -0.86
SNHG1-209ENST00000538654 CCSER2Q9H7U1 834 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 DCLRE1BQ9H816 532 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 MCM9Q9NXL9 1143 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 STOML1Q9UBI4 398 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 SCOCQ9UIL1 159 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 TRIM33Q9UPN9 1127 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 TRAF3IP3Q9Y228 551 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 C2CD2Q9Y426 696 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 LAMB2P55268 1798 aa9.66□□□□□ -0.86
SNHG1-209ENST00000538654 MAPK13O15264 365 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 SLC16A3O15427 465 aaKnown RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 ALAS1P13196 640 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 RPL13P26373 211 aaKnown RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 IL6STP40189 918 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 POLGP54098 1239 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 YARSP54577 528 aaKnown RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 IL9RQ01113 521 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 CUL3Q13618 768 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 MUM1Q2TAK8 710 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 CCDC137Q6PK04 289 aaKnown RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 KCNK18Q7Z418 384 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 ADAT2Q7Z6V5 191 aaKnown RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 SESTD1Q86VW0 696 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 ECHDC2Q86YB7 292 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 ZNF444Q8N0Y2 327 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 C18orf8Q96DM3 657 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 PITPNM3Q9BZ71 974 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 NKX1-2Q9UD57 310 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 ACTL7BQ9Y614 415 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 USH1CQ9Y6N9 552 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 C10orf71Q711Q0 1435 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 MROH7Q68CQ1 1323 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 TCEA3O75764 348 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 PDHA1P08559 390 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 RBP3P10745 1247 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 CYP19A1P11511 503 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 SKIP12755 728 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 BRAFP15056 766 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 SP100P23497 879 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 CLK2P49760 499 aaKnown RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 MECOMQ03112 1051 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 SNX1Q13596 522 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 DALRD3Q5D0E6 543 aaKnown RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 SEL1L2Q5TEA6 688 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 C12orf60Q5U649 245 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 C11orf63Q6NUN7 778 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 SDCCAG8Q86SQ7 713 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 CHCHD4Q8N4Q1 142 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 ANKRD42Q8N9B4 389 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 UHMK1Q8TAS1 419 aaKnown RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 CABLES1Q8TDN4 633 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 UTP4Q969X6 686 aaKnown RBP9.65□□□□□ -0.86
SNHG1-209ENST00000538654 LRRC37BQ96QE4 947 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 GORASP1Q9BQQ3 440 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 ZNF287Q9HBT7 754 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 OSGEPQ9NPF4 335 aa9.65□□□□□ -0.86
SNHG1-209ENST00000538654 TBC1D7Q9P0N9 293 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms