RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 PGK2P07205 417 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 TMOD1P28289 359 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 PIK3CAP42336 1068 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 IRAK1P51617 712 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 SEL1L2Q5TEA6 688 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 KRT39Q6A163 491 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 TRIM50Q86XT4 487 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 UBL4BQ8N7F7 174 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 ZNF564Q8TBZ8 553 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-208ENST00000538070 ZNF526Q8TF50 670 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-208ENST00000538070 SELENOSQ9BQE4 189 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 GPR88Q9GZN0 384 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 CNOT8Q9UFF9 292 aaKnown RBP9.37□□□□□ -0.91
UBE3B-208ENST00000538070 RGS17Q9UGC6 210 aaPredicted RBP9.37□□□□□ -0.91
UBE3B-208ENST00000538070 ANAPC7Q9UJX3 599 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 NOVA2Q9UNW9 492 aaKnown RBP9.37□□□□□ -0.91
UBE3B-208ENST00000538070 DAAM1Q9Y4D1 1078 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 COL4A5P29400 1685 aa9.37□□□□□ -0.91
UBE3B-208ENST00000538070 ADGRA3Q8IWK6 1321 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 TBC1D12O60347 775 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 PSAPP07602 524 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 TMEM253P0C7T8 217 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 MYZAPP0CAP1 466 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 HSD17B3P37058 310 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 JAK3P52333 1124 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 WDR44Q5JSH3 913 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 ZBTB41Q5SVQ8 909 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 KAZNQ674X7 775 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 TMEM161BQ8NDZ6 487 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 PPP1R13LQ8WUF5 828 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 C11orf70Q9BRQ4 267 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 ZNF408Q9H9D4 720 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 RAB20Q9NX57 234 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 GOLGA8KD6RF30 607 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 E7EVH7 732 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 K7ERI5 159 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 HGSO14964 777 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-208ENST00000538070 CLDN3O15551 220 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 ERLIN2O94905 339 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 IBSPP21815 317 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-208ENST00000538070 HOXA7P31268 230 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-208ENST00000538070 GLE1Q53GS7 698 aaKnown RBP9.36□□□□□ -0.91
UBE3B-208ENST00000538070 TMEM270Q6UE05 265 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 CAPN12Q6ZSI9 719 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 SCYL3Q8IZE3 742 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 LRRC71Q8N4P6 559 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 FBXL13Q8NEE6 735 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 ATG4AQ8WYN0 398 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 OTUD5Q96G74 571 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 TSPYL1Q9H0U9 437 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 AS3MTQ9HBK9 375 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 C1orf112Q9NSG2 853 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 PCDHB4Q9Y5E5 795 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 ZNF541Q9H0D2 1346 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 GTPBP10A4D1E9 387 aaKnown RBP9.36□□□□□ -0.91
UBE3B-208ENST00000538070 SLC26A4O43511 780 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 IVLP07476 585 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 NR1D1P20393 614 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 DCAF12L1Q5VU92 463 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 VSIG10LQ86VR7 867 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 NEK9Q8TD19 979 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 PARD3BQ8TEW8 1205 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 ACSF2Q96CM8 615 aaPredicted RBP9.36□□□□□ -0.91
UBE3B-208ENST00000538070 GDF3Q9NR23 364 aa9.36□□□□□ -0.91
UBE3B-208ENST00000538070 KRT19P08727 400 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 PYGMP11217 842 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 MAPK4P31152 587 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 AARSP49588 968 aaKnown RBP eCLIP9.35□□□□□ -0.91
UBE3B-208ENST00000538070 LIG3P49916 1009 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 NLRP11P59045 1033 aaKnown RBP9.35□□□□□ -0.91
UBE3B-208ENST00000538070 SP2Q02086 613 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 MTM1Q13496 603 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 GNPTABQ3T906 1256 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 CCDC38Q502W7 563 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 HP1BP3Q5SSJ5 553 aaPredicted RBP9.35□□□□□ -0.91
UBE3B-208ENST00000538070 C1orf220Q5T0J3 134 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 NLGN2Q8NFZ4 835 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 ADAM33Q9BZ11 813 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 KCND2Q9NZV8 630 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 SUCLA2Q9P2R7 463 aaPredicted RBP9.35□□□□□ -0.91
UBE3B-208ENST00000538070 ASIC3Q9UHC3 531 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 TRPC6Q9Y210 931 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 ZC3H4Q9UPT8 1303 aaKnown RBP9.35□□□□□ -0.91
UBE3B-208ENST00000538070 MYO1CO00159 1063 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 GJB1P08034 283 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 CYP11B1P15538 503 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 FGFR4P22455 802 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 ORC1Q13415 861 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 FKBP1CQ5VVH2 108 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 ALS2CLQ60I27 953 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 SCARA3Q6AZY7 606 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 FOXR2Q6PJQ5 311 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 C4orf19Q8IY42 314 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 THNSL1Q8IYQ7 743 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 TMEM130Q8N3G9 435 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 MGARPQ8TDB4 240 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 EPS8L1Q8TE68 723 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 HAUS1Q96CS2 278 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 MSTO1Q9BUK6 570 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 TEX13BQ9BXU2 312 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms