RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 ABHD8Q96I13 439 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 CENPKQ9BS16 269 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 TRIM9Q9C026 710 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 NACA2Q9H009 215 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 ARL8BQ9NVJ2 186 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 STXBP5LQ9Y2K9 1186 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 PTPN22Q9Y2R2 807 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 MYOCOSA0A1B0GUC4 107 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 VAMP1P23763 118 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 PRKCIP41743 596 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 ARFIP2P53365 341 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 YARSP54577 528 aaKnown RBP11.41□□□□□ -0.58
RTN3-208ENST00000537981 NLRP5P59047 1200 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 CDR2Q01850 454 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 MAP2K5Q13163 448 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 TXNRD1Q16881 649 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 PUS10Q3MIT2 529 aaKnown RBP11.41□□□□□ -0.58
RTN3-208ENST00000537981 CCDC152Q4G0S7 254 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 SLC44A4Q53GD3 710 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 KLHL35Q6PF15 583 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 TAOK1Q7L7X3 1001 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
RTN3-208ENST00000537981 NT5DC3Q86UY8 548 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 ABTB2Q8N961 1025 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 STKLD1Q8NE28 680 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 GAB3Q8WWW8 586 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 ZNF653Q96CK0 615 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 HAUS1Q96CS2 278 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 NR1H4Q96RI1 486 aaPredicted RBP11.41□□□□□ -0.58
RTN3-208ENST00000537981 ARPC5LQ9BPX5 153 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 USP29Q9HBJ7 922 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 ARMCX3Q9UH62 379 aaPredicted RBP11.41□□□□□ -0.58
RTN3-208ENST00000537981 PHTF1Q9UMS5 762 aa11.41□□□□□ -0.58
RTN3-208ENST00000537981 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.41□□□□□ -0.58
RTN3-208ENST00000537981 IGSF9BQ9UPX0 1349 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 ZFYP08048 801 aaPredicted RBP11.4□□□□□ -0.58
RTN3-208ENST00000537981 PABPC4LP0CB38 370 aaKnown RBP11.4□□□□□ -0.58
RTN3-208ENST00000537981 KRT13P13646 458 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 IL15P40933 162 aaPredicted RBP11.4□□□□□ -0.58
RTN3-208ENST00000537981 CD97P48960 835 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 PTENP60484 403 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 ACVR2BQ13705 512 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 RAPH1Q70E73 1250 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 NANOGNBQ7Z5D8 188 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 NAP1L3Q99457 506 aaPredicted RBP11.4□□□□□ -0.58
RTN3-208ENST00000537981 SGIP1Q9BQI5 828 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 ARMT1Q9H993 441 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.4□□□□□ -0.58
RTN3-208ENST00000537981 DOLKQ9UPQ8 538 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 COL4A3BPQ9Y5P4 624 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 BCORQ6W2J9 1755 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 ARFGEF2Q9Y6D5 1785 aa11.4□□□□□ -0.58
RTN3-208ENST00000537981 MARF1Q9Y4F3 1742 aaKnown RBP11.4□□□□□ -0.58
RTN3-208ENST00000537981 TCRBV7S2A1N4TA0A589 114 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 C2orf71A6NGG8 1288 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 IRS4O14654 1257 aaPredicted RBP11.4□□□□□ -0.59
RTN3-208ENST00000537981 CSF1RP07333 972 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 NFKBIAP25963 317 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 PTPN4P29074 926 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 GTF2H1P32780 548 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 CHKAP35790 457 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 KCNJ1P48048 391 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 CPA2P48052 419 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 MARCKSL1P49006 195 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 PSMD7P51665 324 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 CDC16Q13042 620 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 R3HDM1Q15032 1099 aaKnown RBP11.4□□□□□ -0.59
RTN3-208ENST00000537981 SMUG1Q53HV7 270 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 LRRC55Q6ZSA7 311 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 IFNL3Q8IZI9 196 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 SLC25A41Q8N5S1 370 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 U2AF1L4Q8WU68 220 aaKnown RBP11.4□□□□□ -0.59
RTN3-208ENST00000537981 C10orf82Q8WW14 230 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 CLPTM1LQ96KA5 538 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 CDC42EP4Q9H3Q1 356 aaKnown RBP11.4□□□□□ -0.59
RTN3-208ENST00000537981 AAASQ9NRG9 546 aa11.4□□□□□ -0.59
RTN3-208ENST00000537981 DDX43Q9NXZ2 648 aaKnown RBP11.4□□□□□ -0.59
RTN3-208ENST00000537981 AJAP1Q9UKB5 411 aaPredicted RBP11.4□□□□□ -0.59
RTN3-208ENST00000537981 AHDC1Q5TGY3 1603 aaPredicted RBP11.39□□□□□ -0.59
RTN3-208ENST00000537981 PNPLA7Q6ZV29 1317 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 CES2O00748 559 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 SPTLC1O15269 473 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 GSC2O15499 205 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 TFPTP0C1Z6 253 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 CHRNB2P17787 502 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 RASSF2P50749 326 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 EVX2Q03828 476 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 MTMR2Q13614 643 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 RRP1BQ14684 758 aaKnown RBP11.39□□□□□ -0.59
RTN3-208ENST00000537981 TMEM266Q2M3C6 531 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 KCTD21Q4G0X4 260 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 RBM44Q6ZP01 1051 aaKnown RBP11.39□□□□□ -0.59
RTN3-208ENST00000537981 ARHGAP27Q6ZUM4 889 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 DYMQ7RTS9 669 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 SCYL3Q8IZE3 742 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 MTMR14Q8NCE2 650 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 CTNNBL1Q8WYA6 563 aaPredicted RBP11.39□□□□□ -0.59
RTN3-208ENST00000537981 ALG3Q92685 438 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 MAGEB18Q96M61 343 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 STRBPQ96SI9 672 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms