RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 F5H423 210 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 PRPSAP2O60256 369 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 PLEKHM3Q6ZWE6 761 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 UBASH3BQ8TF42 649 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 CMTM5Q96DZ9 223 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 DCUN1D5Q9BTE7 237 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 MMADHCQ9H3L0 296 aaPredicted RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 HERC5Q9UII4 1024 aaKnown RBP5.99□□□□□ -1.45
CSMD1-215ENST00000537824 DAPK2Q9UIK4 370 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 SH3GLB1Q9Y371 365 aa5.99□□□□□ -1.45
CSMD1-215ENST00000537824 PDZK1P1A8MUH7 402 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 CCNE1P24864 410 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 TRIM63Q969Q1 353 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 ZFRQ96KR1 1074 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 METTL22Q9BUU2 404 aaPredicted RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 SPATA2Q9UM82 520 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 ZBTB39O15060 712 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 HSD17B3P37058 310 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 PTK2Q05397 1052 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 NR5A1Q13285 461 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 COG2Q14746 738 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 ODR4Q5SWX8 454 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 SPRTNQ9H040 489 aaPredicted RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 EXOSC4Q9NPD3 245 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 FNDC3AQ9Y2H6 1198 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 IDH3BO43837 385 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 CDH2P19022 906 aaPredicted RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 CCT3P49368 545 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 R3HDM1Q15032 1099 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 B3GNT6Q6ZMB0 384 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 PASD1Q8IV76 773 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 LIMA1Q9UHB6 759 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 ZBED4O75132 1171 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 LGR5O75473 907 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 C4BPBP20851 252 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 SLFN12Q8IYM2 578 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 CCNYQ8ND76 341 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 CASKIN2Q8WXE0 1202 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 TUBA8Q9NY65 449 aaPredicted RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 MBD2Q9UBB5 411 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 STK39Q9UEW8 545 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 ATP4AP20648 1035 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 IL12RB1P42701 662 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 HSPA13P48723 471 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 YARSP54577 528 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 LVRNQ6Q4G3 990 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 C4orf33Q8N1A6 199 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 MTERF3Q96E29 417 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 PCDHA12Q9UN75 941 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 ADGRL1O94910 1474 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 TBKBP1A7MCY6 615 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 SNX2O60749 519 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 CDC25AP30304 524 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 ADRM1Q16186 407 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 TRMT5Q32P41 509 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 ZNF746Q6NUN9 644 aaPredicted RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 C3orf20Q8ND61 904 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 RASGRP4Q8TDF6 673 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 HIF1AQ16665 826 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 POTEEQ6S8J3 1075 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 LRRC74BQ6ZQY2 392 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 SCG3Q8WXD2 468 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 GRIP2Q9C0E4 1043 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 SENP1Q9P0U3 644 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 PTPRKQ15262 1439 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 CLIC2O15247 247 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 PYGMP11217 842 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 GAP43P17677 238 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 MAPRE2Q15555 327 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 MTHFSDQ2M296 383 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 TEX13AQ9BXU3 409 aaPredicted RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 CDC42BPBQ9Y5S2 1711 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 FSBPO95073 299 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 FMNL1O95466 1100 aaPredicted RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 P3H1Q32P28 736 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 RHOT2Q8IXI1 618 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 MARCH10Q8NA82 808 aaPredicted RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 MRPL47Q9HD33 250 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 SRPRBQ9Y5M8 271 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 TRIM49BA6NDI0 452 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 KPNA7A9QM74 516 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 FGAP02671 866 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 JAK1P23458 1154 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 MECOMQ03112 1051 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 BARGINQ6ZT62 677 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 IFNEQ86WN2 208 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 SYTL2Q9HCH5 934 aa5.98□□□□□ -1.45
CSMD1-215ENST00000537824 TLR7Q9NYK1 1049 aaKnown RBP5.98□□□□□ -1.45
CSMD1-215ENST00000537824 STX7O15400 261 aaKnown RBP5.97□□□□□ -1.45
CSMD1-215ENST00000537824 RAD51CO43502 376 aa5.97□□□□□ -1.45
CSMD1-215ENST00000537824 HSPA1AP0DMV8 641 aaKnown RBP5.97□□□□□ -1.45
CSMD1-215ENST00000537824 HSPA1BP0DMV9 641 aaKnown RBP5.97□□□□□ -1.45
CSMD1-215ENST00000537824 LIG4P49917 911 aa5.97□□□□□ -1.45
CSMD1-215ENST00000537824 PABPC4Q13310 644 aaKnown RBP eCLIP5.97□□□□□ -1.45
CSMD1-215ENST00000537824 MKRN4PQ13434 485 aaPredicted RBP5.97□□□□□ -1.45
CSMD1-215ENST00000537824 LAMC2Q13753 1193 aa5.97□□□□□ -1.45
CSMD1-215ENST00000537824 DHX34Q14147 1143 aaKnown RBP5.97□□□□□ -1.45
CSMD1-215ENST00000537824 ANGPT1Q15389 498 aa5.97□□□□□ -1.45
CSMD1-215ENST00000537824 TBC1D10BQ4KMP7 808 aaPredicted RBP5.97□□□□□ -1.45
CSMD1-215ENST00000537824 TJAP1Q5JTD0 557 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms