RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 LRRC8DQ7L1W4 858 aa17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 TMEM192Q8IY95 271 aa17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 FAM84AQ96KN4 292 aa17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 NOC4LQ9BVI4 516 aaKnown RBP17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 EIF2AQ9BY44 585 aaKnown RBP17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 VPS16Q9H269 839 aa17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 MAGEC2Q9UBF1 373 aaPredicted RBP17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 MROH7Q68CQ1 1323 aa17.08■□□□□ 0.32
SFSWAP-206ENST00000537582 A0A1B0GUA9 196 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 DCDC2CA8MYV0 355 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 TLR3O15455 904 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 FGFR1OPO95684 399 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 SERPINC1P01008 464 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 EEF1GP26641 437 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 MTIF2P46199 727 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 OSTNP61366 133 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 RBL2Q08999 1139 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 MYBPC2Q14324 1141 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 GPNMBQ14956 572 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 NOLC1Q14978 699 aaKnown RBP eCLIP17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 SNRNP35Q16560 246 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 SLFN12LQ6IEE8 588 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 GPD1LQ8N335 351 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 TMEM174Q8WUU8 243 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 TUBGCP2Q9BSJ2 902 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 PPP1R12CQ9BZL4 782 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 XPO4Q9C0E2 1151 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 ERVK-5Q9HDB9 667 aa17.07■□□□□ 0.32
SFSWAP-206ENST00000537582 SLC16A3O15427 465 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 CAND2O75155 1236 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 NPTXRO95502 500 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 RPLP2P05387 115 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 TRIM49P0CI25 452 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 TRIM49CP0CI26 452 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 EPB41P11171 864 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 SELPP16109 830 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 PSMC2P35998 433 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 COPB1P53618 953 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 DLG4P78352 724 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 MIIPQ5JXC2 388 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 UBXN11Q5T124 520 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 SARM1Q6SZW1 724 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 FAM114A1Q8IWE2 563 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 TRIM59Q8IWR1 403 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 THNSL1Q8IYQ7 743 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 ZNF710Q8N1W2 664 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 CAGE1Q8TC20 777 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 FBXL18Q96ME1 805 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 WNT8AQ9H1J5 351 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 TMX1Q9H3N1 280 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 HIPK3Q9H422 1215 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 PADI3Q9ULW8 664 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 FRMD4BQ9Y2L6 1034 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 MEFVO15553 781 aaPredicted RBP17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 TEX33O43247 280 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 EXTL3O43909 919 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 MGEA5O60502 916 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 NBNO60934 754 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 PRKCSHP14314 528 aaPredicted RBP17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 CYP2C18P33260 490 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 CCL23P55773 120 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 MARSP56192 900 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 DCAF17Q5H9S7 520 aaPredicted RBP17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 SCLYQ96I15 445 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 TOX2Q96NM4 488 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 TRIM5Q9C035 493 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 ARMCX3Q9UH62 379 aaPredicted RBP17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 TBX21Q9UL17 535 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 HES2Q9Y543 173 aa17.06■□□□□ 0.32
SFSWAP-206ENST00000537582 N4BP3O15049 544 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 OGTO15294 1046 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 ADCY5O95622 1261 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 GNA14O95837 355 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 ZNF75DP51815 510 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 UBASH3AP57075 661 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 SPAG1Q07617 926 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 PAK2Q13177 524 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 BFSP2Q13515 415 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 TCTN1Q2MV58 587 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 C1orf220Q5T0J3 134 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 NOTUMQ6P988 496 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 FRMD5Q7Z6J6 570 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 CCDC155Q8N6L0 562 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 CCDC127Q96BQ5 260 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 POP1Q99575 1024 aaKnown RBP17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 MKNK1Q9BUB5 465 aa17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 TOPORSQ9NS56 1045 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-206ENST00000537582 A0A1B0GTH6 734 aa17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 LRRC10BA6NIK2 292 aa17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 CLTBP09497 229 aa17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 MCF2P10911 925 aa17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 ITGB8P26012 769 aa17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 CYP24A1Q07973 514 aa17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 SLC27A1Q6PCB7 646 aa17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 SLC35C1Q96A29 364 aa17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 CXCL16Q9H2A7 254 aa17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 NXF3Q9H4D5 531 aaKnown RBP17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 MMRN2Q9H8L6 949 aa17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 TMEM39AQ9NV64 488 aa17.04■□□□□ 0.32
SFSWAP-206ENST00000537582 CPSF3Q9UKF6 684 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms