RNA–Protein interactions for RNA: ENST00000537533.1

PTPN6-209, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 3

Gene PTPN6, Length 673 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-209	ENST00000537533	AKAP5	P24588	427 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	DDIT3	P35638	169 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	CEBPZ	Q03701	1054 aa	Known RBP	13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	DUSP6	Q16828	381 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	DCAF4L1	Q3SXM0	396 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	ATF7IP2	Q5U623	682 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	EEF1DP3	Q658K8	133 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	KRI1	Q8N9T8	703 aa	Known RBP	13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	LINC00301	Q8NCQ3	95 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	TMEM161B	Q8NDZ6	487 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	LARP4B	Q92615	738 aa	Known RBP	13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	ZFP42	Q96MM3	310 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	CLIC6	Q96NY7	704 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	FAM193B	Q96PV7	902 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	ACO2	Q99798	780 aa	Known RBP	13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	TCF25	Q9BQ70	676 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	ADPGK	Q9BRR6	497 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	APOL6	Q9BWW8	343 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	TLE6	Q9H808	572 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	PTPRH	Q9HD43	1115 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	USP20	Q9Y2K6	914 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	IRAK3	Q9Y616	596 aa		13.74	□□□□□ -0.21
PTPN6-209	ENST00000537533	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533		H3BQ06	376 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	NRP1	O14786	923 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	SLC16A4	O15374	487 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	PPP6R2	O75170	966 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	F13A1	P00488	732 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	ZSCAN22	P10073	491 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	LIG1	P18858	919 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	PROZ	P22891	400 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	NRIP1	P48552	1158 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	SCNN1G	P51170	649 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	ZNF131	P52739	623 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	SMTN	P53814	917 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	NCKAP1L	P55160	1127 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	DLX2	Q07687	328 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	RAD51AP2	Q09MP3	1159 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	GRIK3	Q13003	919 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	KCNC3	Q14003	757 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	MCM6	Q14566	821 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	SMC1A	Q14683	1233 aa	Known RBP	13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	TMEM132A	Q24JP5	1023 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	SPECC1	Q5M775	1068 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	PLPP4	Q5VZY2	271 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	TMEM184A	Q6ZMB5	413 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	GPBP1	Q86WP2	473 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	MRPL43	Q8N983	215 aa	Known RBP	13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	RASSF8	Q8NHQ8	419 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	ZNF396	Q96N95	335 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	REEP2	Q9BRK0	252 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	MRPL4	Q9BYD3	311 aa	Known RBP	13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	GBP3	Q9H0R5	595 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	ZBP1	Q9H171	429 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	IGFLR1	Q9H665	355 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	ENTPD7	Q9NQZ7	604 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	SNTG2	Q9NY99	539 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	LARS	Q9P2J5	1176 aa	Known RBP	13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	STK17A	Q9UEE5	414 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	CCDC39	Q9UFE4	941 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	FAN1	Q9Y2M0	1017 aa		13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	PDCD11	Q14690	1871 aa	Known RBP	13.73	□□□□□ -0.21
PTPN6-209	ENST00000537533	C5orf42	Q9H799	3197 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	GRXCR2	A6NFK2	248 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	C2orf71	A6NGG8	1288 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	HIDE1	A8MVS5	230 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533		H0YCG3	227 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	ABLIM1	O14639	778 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	LINC01565	O15544	149 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	TBX10	O75333	385 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	YEATS4	O95619	227 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	BRD1	O95696	1058 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	GLP2R	O95838	553 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	EFEMP2	O95967	443 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	CTSA	P10619	480 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	MAPT	P10636	758 aa	Known RBP	13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	SCP2	P22307	547 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	TXLNA	P40222	546 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	GIT2	Q14161	759 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	BMS1	Q14692	1282 aa	Known RBP	13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	STK38	Q15208	465 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	TMC7	Q7Z402	723 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	RBM23	Q86U06	439 aa	Known RBP	13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	VPS52	Q8N1B4	723 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	MSLNL	Q96KJ4	702 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	UHRF1	Q96T88	793 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	VN1R3	Q9BXE9	311 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	MARCH5	Q9NX47	278 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	KLK14	Q9P0G3	267 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	CLEC1B	Q9P126	229 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	PARP2	Q9UGN5	583 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	TCHH	Q07283	1943 aa		13.72	□□□□□ -0.21
PTPN6-209	ENST00000537533	PER2	O15055	1255 aa		13.71	□□□□□ -0.21
PTPN6-209	ENST00000537533	SPTLC2	O15270	562 aa		13.71	□□□□□ -0.21
PTPN6-209	ENST00000537533	RECQL4	O94761	1208 aa		13.71	□□□□□ -0.21
PTPN6-209	ENST00000537533	CACNB1	Q02641	598 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN6-209	ENST00000537533	COASY	Q13057	564 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms