RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CD101Q93033 1021 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 GMLQ99445 158 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 NUP85Q9BW27 656 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 HOMER2Q9NSB8 354 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 DDX20Q9UHI6 824 aaKnown RBP15.4■□□□□ 0.06
USP44-203ENST00000537435 TCRBV7S2A1N4TA0A589 114 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 H0YHG0 523 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 PODXLO00592 558 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 SPOPO43791 374 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 GGPS1O95749 300 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 MFAP3P55082 362 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 NCKAP1LP55160 1127 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 SNRPFP62306 86 aaKnown RBP15.4■□□□□ 0.06
USP44-203ENST00000537435 SNRNP35Q16560 246 aaKnown RBP15.4■□□□□ 0.06
USP44-203ENST00000537435 FAM102BQ5T8I3 360 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 ICE2Q659A1 982 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 MCF2L2Q86YR7 1114 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 CNPY4Q8N129 248 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 MDM1Q8TC05 714 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 MORC4Q8TE76 937 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 SHC3Q92529 594 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 CCDC127Q96BQ5 260 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 SAAL1Q96ER3 474 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 ZNF341Q9BYN7 854 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 CNOT10Q9H9A5 744 aaKnown RBP15.4■□□□□ 0.06
USP44-203ENST00000537435 USP20Q9Y2K6 914 aa15.4■□□□□ 0.06
USP44-203ENST00000537435 ANKRD63C9JTQ0 380 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 ASNSP08243 561 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 EIF2AK2P19525 551 aaKnown RBP15.39■□□□□ 0.05
USP44-203ENST00000537435 ADSSP30520 456 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 PLA2G4FQ68DD2 849 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 PRPF38AQ8NAV1 312 aaKnown RBP15.39■□□□□ 0.05
USP44-203ENST00000537435 SYTL5Q8TDW5 730 aaPredicted RBP15.39■□□□□ 0.05
USP44-203ENST00000537435 ZNF653Q96CK0 615 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 IWS1Q96ST2 819 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 RAVER2Q9HCJ3 691 aaKnown RBP15.39■□□□□ 0.05
USP44-203ENST00000537435 TBC1D22BQ9NU19 505 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 LOXHD1Q8IVV2 1947 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 TLDC2A0PJX2 215 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 CCDC169A6NNP5 214 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 CYP1A2P05177 515 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 HNRNPH1P31943 449 aaKnown RBP15.39■□□□□ 0.05
USP44-203ENST00000537435 CDR1P51861 262 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 BYSLQ13895 437 aaKnown RBP15.39■□□□□ 0.05
USP44-203ENST00000537435 SLC29A2Q14542 456 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 KRT39Q6A163 491 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 SLC13A5Q86YT5 568 aaPredicted RBP15.39■□□□□ 0.05
USP44-203ENST00000537435 C4orf19Q8IY42 314 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 TAAR1Q96RJ0 339 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 POP1Q99575 1024 aaKnown RBP15.39■□□□□ 0.05
USP44-203ENST00000537435 KIFC3Q9BVG8 833 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 TIPINQ9BVW5 301 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 MTRF1LQ9UGC7 380 aaKnown RBP15.39■□□□□ 0.05
USP44-203ENST00000537435 PCDHA3Q9Y5H8 950 aa15.39■□□□□ 0.05
USP44-203ENST00000537435 C5orf60A6NFR6 353 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 SMIM23A6NLE4 172 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 CYP11B1P15538 503 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 COILP38432 576 aaPredicted RBP15.38■□□□□ 0.05
USP44-203ENST00000537435 XKR9Q5GH70 373 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 UBAP2Q5T6F2 1119 aaKnown RBP15.38■□□□□ 0.05
USP44-203ENST00000537435 KCNV1Q6PIU1 500 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 SUGP1Q8IWZ8 645 aaKnown RBP15.38■□□□□ 0.05
USP44-203ENST00000537435 CCDC105Q8IYK2 499 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 HELQQ8TDG4 1101 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 PARD3BQ8TEW8 1205 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 SEMA4AQ9H3S1 761 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 PARP2Q9UGN5 583 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 GTF3C4Q9UKN8 822 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 MTUS1Q9ULD2 1270 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 TBX20Q9UMR3 447 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 PHF20L1A8MW92 1017 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 ATP9AO75110 1047 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 RARAP10276 462 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 MYCLP12524 364 aaPredicted RBP15.38■□□□□ 0.05
USP44-203ENST00000537435 GBP1P32455 592 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 PDE6CP51160 858 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 PSMC5P62195 406 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 CYP1B1Q16678 543 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 NSMFQ6X4W1 530 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 TATDN2Q93075 761 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 ELMO3Q96BJ8 720 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 PGM2Q96G03 612 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 SEC16BQ96JE7 1060 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 TOPORSQ9NS56 1045 aaPredicted RBP15.38■□□□□ 0.05
USP44-203ENST00000537435 EXOC7Q9UPT5 735 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 PTPN22Q9Y2R2 807 aa15.38■□□□□ 0.05
USP44-203ENST00000537435 CNGA1P29973 690 aa15.37■□□□□ 0.05
USP44-203ENST00000537435 KCNJ1P48048 391 aa15.37■□□□□ 0.05
USP44-203ENST00000537435 CDR2Q01850 454 aa15.37■□□□□ 0.05
USP44-203ENST00000537435 GHRHRQ02643 423 aa15.37■□□□□ 0.05
USP44-203ENST00000537435 CCDC121Q6ZUS5 278 aa15.37■□□□□ 0.05
USP44-203ENST00000537435 LARGE2Q8N3Y3 721 aa15.37■□□□□ 0.05
USP44-203ENST00000537435 TMEM161BQ8NDZ6 487 aa15.37■□□□□ 0.05
USP44-203ENST00000537435 UHMK1Q8TAS1 419 aaKnown RBP15.37■□□□□ 0.05
USP44-203ENST00000537435 CABS1Q96KC9 395 aa15.37■□□□□ 0.05
USP44-203ENST00000537435 XPO6Q96QU8 1125 aaKnown RBP15.37■□□□□ 0.05
USP44-203ENST00000537435 AZI2Q9H6S1 392 aa15.37■□□□□ 0.05
USP44-203ENST00000537435 TMEM8AQ9HCN3 771 aa15.37■□□□□ 0.05
USP44-203ENST00000537435 TCEAL9Q9UHQ7 104 aa15.37■□□□□ 0.05
USP44-203ENST00000537435 FGFR4P22455 802 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms