RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 TBX21Q9UL17 535 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 PIN4Q9Y237 131 aaKnown RBP12.58□□□□□ -0.4
CDCA3-206ENST00000536241 SIP14410 1827 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 TRIM43BA6NCK2 446 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 KCNJ18B7U540 433 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 TULP1O00294 542 aaPredicted RBP12.57□□□□□ -0.4
CDCA3-206ENST00000536241 N4BP3O15049 544 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 NBNO60934 754 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 PSMC2P35998 433 aaKnown RBP12.57□□□□□ -0.4
CDCA3-206ENST00000536241 ACOT2P49753 483 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 PAK2Q13177 524 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 KCNJ12Q14500 433 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 ZNF568Q3ZCX4 644 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 TCP11X2Q5H9J9 407 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 NOTUMQ6P988 496 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 THNSL1Q8IYQ7 743 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 GPD1LQ8N335 351 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 TRIM43Q96BQ3 446 aaPredicted RBP12.57□□□□□ -0.4
CDCA3-206ENST00000536241 FAM213AQ9BRX8 229 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 EIF2AQ9BY44 585 aaKnown RBP12.57□□□□□ -0.4
CDCA3-206ENST00000536241 WNT8AQ9H1J5 351 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 CDT1Q9H211 546 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 GRPEL1Q9HAV7 217 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 MAGEC2Q9UBF1 373 aaPredicted RBP12.57□□□□□ -0.4
CDCA3-206ENST00000536241 FRMD4BQ9Y2L6 1034 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 DNAH12Q6ZR08 3092 aa12.57□□□□□ -0.4
CDCA3-206ENST00000536241 AP5Z1O43299 807 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 EXTL3O43909 919 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 NPTXRO95502 500 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 GNA14O95837 355 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 LDHAP00338 332 aaKnown RBP12.56□□□□□ -0.4
CDCA3-206ENST00000536241 ZSCAN20P17040 1043 aaPredicted RBP12.56□□□□□ -0.4
CDCA3-206ENST00000536241 ITGB8P26012 769 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 TNFSF9P41273 254 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 OSTNP61366 133 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 CCDC40Q4G0X9 1142 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 ZBTB41Q5SVQ8 909 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 CRELD2Q6UXH1 353 aaPredicted RBP12.56□□□□□ -0.4
CDCA3-206ENST00000536241 CBWD2Q8IUF1 395 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 FAM114A1Q8IWE2 563 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 FAM186BQ8IYM0 893 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 CEP120Q8N960 986 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 BORCS6Q96GS4 357 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 CNOT6LQ96LI5 555 aaKnown RBP12.56□□□□□ -0.4
CDCA3-206ENST00000536241 FBXL18Q96ME1 805 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 ADPGKQ9BRR6 497 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 TMX1Q9H3N1 280 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 PRDM5Q9NQX1 630 aaPredicted RBP12.56□□□□□ -0.4
CDCA3-206ENST00000536241 CHST12Q9NRB3 414 aa12.56□□□□□ -0.4
CDCA3-206ENST00000536241 LRRC10BA6NIK2 292 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 ZNF233A6NK53 670 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 KIAA0391O15091 583 aaKnown RBP12.55□□□□□ -0.4
CDCA3-206ENST00000536241 OGTO15294 1046 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 MCF2P10911 925 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 EPB41P11171 864 aaKnown RBP12.55□□□□□ -0.4
CDCA3-206ENST00000536241 NOLC1Q14978 699 aaKnown RBP eCLIP12.55□□□□□ -0.4
CDCA3-206ENST00000536241 KRT31Q15323 416 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 SNRNP35Q16560 246 aaKnown RBP12.55□□□□□ -0.4
CDCA3-206ENST00000536241 UBXN11Q5T124 520 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 TWF2Q6IBS0 349 aaKnown RBP12.55□□□□□ -0.4
CDCA3-206ENST00000536241 SLC27A1Q6PCB7 646 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 FRMD5Q7Z6J6 570 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 RTN4RL1Q86UN2 441 aaPredicted RBP12.55□□□□□ -0.4
CDCA3-206ENST00000536241 TMEM192Q8IY95 271 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 DBF4BQ8NFT6 615 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 MKNK1Q9BUB5 465 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 IFIH1Q9BYX4 1025 aaKnown RBP12.55□□□□□ -0.4
CDCA3-206ENST00000536241 KIAA1586Q9HCI6 787 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
CDCA3-206ENST00000536241 ARMCX3Q9UH62 379 aaPredicted RBP12.55□□□□□ -0.4
CDCA3-206ENST00000536241 KIAA0355O15063 1070 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 SLC16A3O15427 465 aaKnown RBP12.54□□□□□ -0.4
CDCA3-206ENST00000536241 FAM189A1O60320 539 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 MGEA5O60502 916 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 SERPINC1P01008 464 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 TIMP1P01033 207 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 ADRB2P07550 413 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 STAG3L1P0CL83 205 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 RAG1P15918 1043 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 EEF1GP26641 437 aaKnown RBP12.54□□□□□ -0.4
CDCA3-206ENST00000536241 MTIF2P46199 727 aaKnown RBP12.54□□□□□ -0.4
CDCA3-206ENST00000536241 MARSP56192 900 aaKnown RBP12.54□□□□□ -0.4
CDCA3-206ENST00000536241 FANCCQ00597 558 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 DSC3Q14574 896 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 PLEKHG4Q58EX7 1191 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 DEFB128Q7Z7B8 93 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 TNS4Q8IZW8 715 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 MFSD14AQ96MC6 490 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 NAP1L5Q96NT1 182 aaPredicted RBP12.54□□□□□ -0.4
CDCA3-206ENST00000536241 ADAM2Q99965 735 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 TUBGCP2Q9BSJ2 902 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 TRIM6Q9C030 488 aaPredicted RBP12.54□□□□□ -0.4
CDCA3-206ENST00000536241 VPS16Q9H269 839 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 METTL14Q9HCE5 456 aaKnown RBP12.54□□□□□ -0.4
CDCA3-206ENST00000536241 TAB2Q9NYJ8 693 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 LIMA1Q9UHB6 759 aaKnown RBP12.54□□□□□ -0.4
CDCA3-206ENST00000536241 CPSF3Q9UKF6 684 aaKnown RBP12.54□□□□□ -0.4
CDCA3-206ENST00000536241 HES2Q9Y543 173 aa12.54□□□□□ -0.4
CDCA3-206ENST00000536241 MAPK13O15264 365 aa12.53□□□□□ -0.4
CDCA3-206ENST00000536241 PARNO95453 639 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms