RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 MIIPQ5JXC2 388 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 SNAP47Q5SQN1 464 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 BMP8AQ7Z5Y6 402 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 GPR142Q7Z601 462 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 GOLM1Q8NBJ4 401 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 EDAQ92838 391 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 TEKT1Q969V4 418 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 SLC6A18Q96N87 628 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 PAGR1Q9BTK6 254 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 TSPYL4Q9UJ04 414 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 GTF3C3Q9Y5Q9 886 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 LTBP2Q14767 1821 aa4.99□□□□□ -1.61
YBX3-205ENST00000536107 DCHS1Q96JQ0 3298 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 TPRP12270 2363 aaKnown RBP4.98□□□□□ -1.61
YBX3-205ENST00000536107 EPOPA6NHQ4 379 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 H0Y8X5 98 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 SNAP23O00161 211 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 DDX3XO00571 662 aaKnown RBP eCLIP4.98□□□□□ -1.61
YBX3-205ENST00000536107 ZNF623O75123 536 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 TAF5LO75529 589 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 IL1R1P14778 569 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 GBP2P32456 591 aaPredicted RBP4.98□□□□□ -1.61
YBX3-205ENST00000536107 FAM160A1Q05DH4 1040 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 ABHD18Q0P651 414 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 FOXE3Q13461 319 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 LRRC41Q15345 812 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 CWF19L2Q2TBE0 894 aaKnown RBP4.98□□□□□ -1.61
YBX3-205ENST00000536107 RNF180Q86T96 592 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 RELL1Q8IUW5 271 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 KIAA2013Q8IYS2 634 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 LZTR1Q8N653 840 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 TRPV1Q8NER1 839 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 FAM151AQ8WW52 585 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 FCRL3Q96P31 734 aaPredicted RBP4.98□□□□□ -1.61
YBX3-205ENST00000536107 RSRP1Q9BUV0 290 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 LRRC3Q9BY71 257 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 IKZF4Q9H2S9 585 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 GREM2Q9H772 168 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 IL23AQ9NPF7 189 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 FLRT1Q9NZU1 646 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 DBF4Q9UBU7 674 aaPredicted RBP4.98□□□□□ -1.61
YBX3-205ENST00000536107 MORF4L1Q9UBU8 362 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 PRKAG3Q9UGI9 489 aa4.98□□□□□ -1.61
YBX3-205ENST00000536107 SIPA1L3O60292 1781 aaPredicted RBP4.98□□□□□ -1.61
YBX3-205ENST00000536107 REV3LO60673 3130 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 SETXQ7Z333 2677 aaKnown RBP4.97□□□□□ -1.61
YBX3-205ENST00000536107 MAST2Q6P0Q8 1798 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 COL4A6Q14031 1691 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.97□□□□□ -1.61
YBX3-205ENST00000536107 KIF28PB7ZC32 967 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 SHOXO15266 292 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 SEPT4O43236 478 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 PLIN1O60240 522 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 FRAT2O75474 233 aaPredicted RBP4.97□□□□□ -1.61
YBX3-205ENST00000536107 PCCAP05165 728 aaPredicted RBP4.97□□□□□ -1.61
YBX3-205ENST00000536107 GARTP22102 1010 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 AVPR2P30518 371 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 NBL1P41271 181 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 HMGCS2P54868 508 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 VCPP55072 806 aaKnown RBP4.97□□□□□ -1.61
YBX3-205ENST00000536107 PPP2CBP62714 309 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 PPP2CAP67775 309 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 CHRNDQ07001 517 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 DMWDQ09019 674 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 SPP2Q13103 211 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 CHAF1AQ13111 956 aaPredicted RBP4.97□□□□□ -1.61
YBX3-205ENST00000536107 PWP1Q13610 501 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 HERC4Q5GLZ8 1057 aaPredicted RBP4.97□□□□□ -1.61
YBX3-205ENST00000536107 FKBP1CQ5VVH2 108 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 DPP9Q86TI2 863 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 ADHFE1Q8IWW8 467 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 USP6NLQ92738 828 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 MYD88Q99836 296 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 DUSP9Q99956 384 aaKnown RBP4.97□□□□□ -1.61
YBX3-205ENST00000536107 PORCNQ9H237 461 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 EHMT1Q9H9B1 1298 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 BRMS1Q9HCU9 246 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 XPNPEP3Q9NQH7 507 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 STARD7Q9NQZ5 370 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 RNF19AQ9NV58 838 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 CWC25Q9NXE8 425 aaPredicted RBP4.97□□□□□ -1.61
YBX3-205ENST00000536107 CHPF2Q9P2E5 772 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 FBLN5Q9UBX5 448 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 NUDCQ9Y266 331 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 IVNS1ABPQ9Y6Y0 642 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 PSME4Q14997 1843 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 ACACBO00763 2458 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 MYO9BQ13459 2157 aa4.97□□□□□ -1.61
YBX3-205ENST00000536107 MGAMO43451 1857 aa4.96□□□□□ -1.61
YBX3-205ENST00000536107 TNFRSF10CO14798 259 aa4.96□□□□□ -1.62
YBX3-205ENST00000536107 RARBP10826 455 aa4.96□□□□□ -1.62
YBX3-205ENST00000536107 CYP2C18P33260 490 aa4.96□□□□□ -1.62
YBX3-205ENST00000536107 HERVK_113P62684 666 aa4.96□□□□□ -1.62
YBX3-205ENST00000536107 POU4F1Q01851 419 aa4.96□□□□□ -1.62
YBX3-205ENST00000536107 FAM47AQ5JRC9 791 aa4.96□□□□□ -1.62
YBX3-205ENST00000536107 SLFN13Q68D06 897 aa4.96□□□□□ -1.62
YBX3-205ENST00000536107 PKN3Q6P5Z2 889 aa4.96□□□□□ -1.62
YBX3-205ENST00000536107 ETV3LQ6ZN32 361 aa4.96□□□□□ -1.62
YBX3-205ENST00000536107 ANKRD33Q7Z3H0 272 aa4.96□□□□□ -1.62
YBX3-205ENST00000536107 VPS37DQ86XT2 251 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms