RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 LINC01599Q8WXQ3 324 aa17.02■□□□□ 0.32
CNN1-202ENST00000535659 TSG101Q99816 390 aa17.02■□□□□ 0.32
CNN1-202ENST00000535659 MSTO1Q9BUK6 570 aa17.02■□□□□ 0.32
CNN1-202ENST00000535659 EIF2AQ9BY44 585 aaKnown RBP17.02■□□□□ 0.32
CNN1-202ENST00000535659 TRIM6Q9C030 488 aaPredicted RBP17.02■□□□□ 0.32
CNN1-202ENST00000535659 CDT1Q9H211 546 aa17.02■□□□□ 0.32
CNN1-202ENST00000535659 PCIF1Q9H4Z3 704 aa17.02■□□□□ 0.32
CNN1-202ENST00000535659 FAM105AQ9NUU6 356 aa17.02■□□□□ 0.32
CNN1-202ENST00000535659 RWDD2AQ9UIY3 292 aa17.02■□□□□ 0.32
CNN1-202ENST00000535659 PCDHB2Q9Y5E7 798 aa17.02■□□□□ 0.32
CNN1-202ENST00000535659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.01■□□□□ 0.31
CNN1-202ENST00000535659 BICDL2A1A5D9 508 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 C9IYK1 514 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 KIAA0391O15091 583 aaKnown RBP17.01■□□□□ 0.31
CNN1-202ENST00000535659 EFCAB14O75071 495 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 SKIP12755 728 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 STX17P56962 302 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 LRRC63Q05C16 580 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 MYBPC2Q14324 1141 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 NOLC1Q14978 699 aaKnown RBP eCLIP17.01■□□□□ 0.31
CNN1-202ENST00000535659 NFIL3Q16649 462 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 EDRF1Q3B7T1 1238 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 ZCWPW2Q504Y3 356 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 TMEM240Q5SV17 173 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 PSRC1Q6PGN9 363 aaPredicted RBP17.01■□□□□ 0.31
CNN1-202ENST00000535659 FOXR2Q6PJQ5 311 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.01■□□□□ 0.31
CNN1-202ENST00000535659 CBWD1Q9BRT8 395 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 DNAJC25Q9H1X3 360 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 DMAC2Q9NW81 257 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 AGO2Q9UKV8 859 aaKnown RBP17.01■□□□□ 0.31
CNN1-202ENST00000535659 CTNND2Q9UQB3 1225 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 TRIM49BA6NDI0 452 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 H0YGN5 161 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 OGTO15294 1046 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 BAIAP3O94812 1187 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 LDHAP00338 332 aaKnown RBP17.01■□□□□ 0.31
CNN1-202ENST00000535659 HARSP12081 509 aaKnown RBP17.01■□□□□ 0.31
CNN1-202ENST00000535659 RPL13P26373 211 aaKnown RBP17.01■□□□□ 0.31
CNN1-202ENST00000535659 MAGEA10P43363 369 aaPredicted RBP17.01■□□□□ 0.31
CNN1-202ENST00000535659 RAB27AP51159 221 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 ADAM9Q13443 819 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 ANO6Q4KMQ2 910 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 OTOP2Q7RTS6 562 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 MRPL10Q7Z7H8 261 aaKnown RBP17.01■□□□□ 0.31
CNN1-202ENST00000535659 SLC9A9Q8IVB4 645 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 THNSL1Q8IYQ7 743 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 SMG8Q8ND04 991 aaKnown RBP17.01■□□□□ 0.31
CNN1-202ENST00000535659 TET1Q8NFU7 2136 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 MED15Q96RN5 788 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 NAT10Q9H0A0 1025 aaKnown RBP17.01■□□□□ 0.31
CNN1-202ENST00000535659 HSPBP1Q9NZL4 362 aa17.01■□□□□ 0.31
CNN1-202ENST00000535659 EOMESO95936 686 aa17■□□□□ 0.31
CNN1-202ENST00000535659 NR3C1P04150 777 aa17■□□□□ 0.31
CNN1-202ENST00000535659 KYAT1Q16773 422 aa17■□□□□ 0.31
CNN1-202ENST00000535659 TTI2Q6NXR4 508 aa17■□□□□ 0.31
CNN1-202ENST00000535659 LRSAM1Q6UWE0 723 aa17■□□□□ 0.31
CNN1-202ENST00000535659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17■□□□□ 0.31
CNN1-202ENST00000535659 C11orf57Q6ZUT1 292 aaPredicted RBP17■□□□□ 0.31
CNN1-202ENST00000535659 ECHDC2Q86YB7 292 aa17■□□□□ 0.31
CNN1-202ENST00000535659 XXYLT1Q8NBI6 393 aa17■□□□□ 0.31
CNN1-202ENST00000535659 RNF216Q9NWF9 866 aaPredicted RBP17■□□□□ 0.31
CNN1-202ENST00000535659 IPPQ9Y573 584 aa17■□□□□ 0.31
CNN1-202ENST00000535659 EXTL3O43909 919 aa16.99■□□□□ 0.31
CNN1-202ENST00000535659 NR2F2P24468 414 aa16.99■□□□□ 0.31
CNN1-202ENST00000535659 GRM5P41594 1212 aa16.99■□□□□ 0.31
CNN1-202ENST00000535659 FXR1P51114 621 aaKnown RBP eCLIP16.99■□□□□ 0.31
CNN1-202ENST00000535659 CYP2J2P51589 502 aa16.99■□□□□ 0.31
CNN1-202ENST00000535659 ZNF445P59923 1031 aa16.99■□□□□ 0.31
CNN1-202ENST00000535659 FKBP3Q00688 224 aaKnown RBP16.99■□□□□ 0.31
CNN1-202ENST00000535659 GPD1LQ8N335 351 aa16.99■□□□□ 0.31
CNN1-202ENST00000535659 HERVK_113Q902F9 699 aa16.99■□□□□ 0.31
CNN1-202ENST00000535659 PGBD4Q96DM1 585 aa16.99■□□□□ 0.31
CNN1-202ENST00000535659 DUSP9Q99956 384 aaKnown RBP16.99■□□□□ 0.31
CNN1-202ENST00000535659 RNF39Q9H2S5 420 aa16.99■□□□□ 0.31
CNN1-202ENST00000535659 ELAC1Q9H777 363 aaKnown RBP16.99■□□□□ 0.31
CNN1-202ENST00000535659 KIAA1586Q9HCI6 787 aa16.99■□□□□ 0.31
CNN1-202ENST00000535659 SNTG2Q9NY99 539 aa16.99■□□□□ 0.31
CNN1-202ENST00000535659 HES2Q9Y543 173 aa16.99■□□□□ 0.31
CNN1-202ENST00000535659 GOLGA8IPA6NC78 632 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 GOLGA8JA6NMD2 632 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 CETN3O15182 167 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 FAM189A1O60320 539 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 EXOC3O60645 756 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 CLTAP09496 248 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 STAG3L1P0CL83 205 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 ITGA4P13612 1032 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 ACOT2P49753 483 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 OSTNP61366 133 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 SEZ6Q53EL9 994 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 ZNF598Q86UK7 904 aaKnown RBP16.98■□□□□ 0.31
CNN1-202ENST00000535659 HACE1Q8IYU2 909 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 CEP120Q8N960 986 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 ZSWIM2Q8NEG5 633 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 ENOX1Q8TC92 643 aaKnown RBP16.98■□□□□ 0.31
CNN1-202ENST00000535659 SAAL1Q96ER3 474 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 FBXL18Q96ME1 805 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 ACAP3Q96P50 834 aa16.98■□□□□ 0.31
CNN1-202ENST00000535659 GDF15Q99988 308 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms