RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 HOXA7P31268 230 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-214ENST00000535493 DRG2P55039 364 aaKnown RBP14.37□□□□□ -0.11
HDAC4-214ENST00000535493 RRP1BQ14684 758 aaKnown RBP14.37□□□□□ -0.11
HDAC4-214ENST00000535493 TRIM68Q6AZZ1 485 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 SIAH1Q8IUQ4 282 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 SPIRE2Q8WWL2 714 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 TGS1Q96RS0 853 aaKnown RBP14.37□□□□□ -0.11
HDAC4-214ENST00000535493 CDCA7Q9BWT1 371 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-214ENST00000535493 NSRP1Q9H0G5 558 aaKnown RBP14.37□□□□□ -0.11
HDAC4-214ENST00000535493 OLFML3Q9NRN5 406 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 TNRC6CQ9HCJ0 1690 aaKnown RBP14.37□□□□□ -0.11
HDAC4-214ENST00000535493 TMEM150BA6NC51 233 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 F5H6K3 240 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 PODXLO00592 558 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 SPAG7O75391 227 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 SUN1O94901 812 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 GSTA1P08263 222 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 SIX1Q15475 284 aaPredicted RBP14.37□□□□□ -0.11
HDAC4-214ENST00000535493 SPATA21Q7Z572 469 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 FBXO11Q86XK2 927 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 ANKLE1Q8NAG6 615 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 MBOAT7Q96N66 472 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 HSD17B14Q9BPX1 270 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 AMNQ9BXJ7 453 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 HOMER3Q9NSC5 361 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 CNOT7Q9UIV1 285 aaKnown RBP14.37□□□□□ -0.11
HDAC4-214ENST00000535493 ZBTB21Q9ULJ3 1066 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 CNTNAP4Q9C0A0 1308 aa14.37□□□□□ -0.11
HDAC4-214ENST00000535493 TOM1O60784 492 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 PIAS1O75925 651 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 ECEL1O95672 775 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 ANXA13P27216 316 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 SSTR3P32745 418 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-214ENST00000535493 MSH2P43246 934 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 SGO2Q562F6 1265 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 LRCH2Q5VUJ6 765 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 FAM196AQ6ZSG2 479 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 MIGA2Q7L4E1 593 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 SLF2Q8IX21 1173 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 RHOT2Q8IXI1 618 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 ZNF564Q8TBZ8 553 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-214ENST00000535493 DHX38Q92620 1227 aaKnown RBP14.36□□□□□ -0.11
HDAC4-214ENST00000535493 ETNK1Q9HBU6 452 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 ZMYND8Q9ULU4 1186 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-214ENST00000535493 DIS3Q9Y2L1 958 aaKnown RBP14.36□□□□□ -0.11
HDAC4-214ENST00000535493 ATAD5Q96QE3 1844 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 O00370 1275 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 OAS1P00973 400 aaKnown RBP14.36□□□□□ -0.11
HDAC4-214ENST00000535493 STX2P32856 288 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 JAG1P78504 1218 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 BNIP1Q12981 228 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 SLMAPQ14BN4 828 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 Q4G0T1 1027 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 OTOP1Q7RTM1 612 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 PLEKHO2Q8TD55 490 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 CCDC127Q96BQ5 260 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 ZNF653Q96CK0 615 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 ADAM22Q9P0K1 906 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 NKX1-2Q9UD57 310 aaPredicted RBP14.36□□□□□ -0.11
HDAC4-214ENST00000535493 PASKQ96RG2 1323 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 SBF2Q86WG5 1849 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 PLIN4Q96Q06 1357 aa14.36□□□□□ -0.11
HDAC4-214ENST00000535493 ATP2B4P23634 1241 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 GJC1P36383 396 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 RBM5P52756 815 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC4-214ENST00000535493 ITGA8P53708 1063 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 KIF22Q14807 665 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 GALNTL6Q49A17 601 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 CERKLQ49MI3 558 aaPredicted RBP14.35□□□□□ -0.11
HDAC4-214ENST00000535493 TNFAIP8L3Q5GJ75 292 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 CYP4F22Q6NT55 531 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 KIF9Q9HAQ2 790 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 SLCO1B3Q9NPD5 702 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 NOP53Q9NZM5 478 aaKnown RBP14.35□□□□□ -0.11
HDAC4-214ENST00000535493 R3HDM2Q9Y2K5 976 aaKnown RBP14.35□□□□□ -0.11
HDAC4-214ENST00000535493 ENO4A6NNW6 628 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 THAP12O43422 761 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 BCRP11274 1271 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 FOXN2P32314 431 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 GCKP35557 465 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 SREBF1P36956 1147 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 PPP2R5EQ16537 467 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 TRAPPC3LQ5T215 181 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 NAP1L4Q99733 375 aaKnown RBP14.35□□□□□ -0.11
HDAC4-214ENST00000535493 MTUS1Q9ULD2 1270 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 SPATA31A5Q5VU36 1347 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 SPATA31A7Q8IWB4 1347 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 CFAP73A6NFT4 308 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 H0Y3Z8 333 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 K7ENM7 598 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 HIP1RO75146 1068 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 CYP3A4P08684 503 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 TARSP26639 723 aaKnown RBP14.35□□□□□ -0.11
HDAC4-214ENST00000535493 SPDYCQ5MJ68 293 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 CCDC174Q6PII3 467 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 ECHDC2Q86YB7 292 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 EPS8L1Q8TE68 723 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 SLC5A5Q92911 643 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 FAM20AQ96MK3 541 aa14.35□□□□□ -0.11
HDAC4-214ENST00000535493 TAOK3Q9H2K8 898 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms