RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 NPIPB8E9PQR5 432 aa6.91□□□□□ -1.3
PRKDC-205ENST00000535375 GSPT1P15170 499 aaKnown RBP6.91□□□□□ -1.3
PRKDC-205ENST00000535375 MALLQ13021 153 aa6.91□□□□□ -1.3
PRKDC-205ENST00000535375 NOMO1Q15155 1222 aa6.91□□□□□ -1.3
PRKDC-205ENST00000535375 METTL24Q5JXM2 366 aa6.91□□□□□ -1.3
PRKDC-205ENST00000535375 DOK3Q7L591 496 aa6.91□□□□□ -1.3
PRKDC-205ENST00000535375 XYLT1Q86Y38 959 aa6.91□□□□□ -1.3
PRKDC-205ENST00000535375 HS3ST3A1Q9Y663 406 aa6.91□□□□□ -1.3
PRKDC-205ENST00000535375 ZMYM3Q14202 1370 aa6.91□□□□□ -1.3
PRKDC-205ENST00000535375 KLRG2A4D1S0 409 aaPredicted RBP6.9□□□□□ -1.3
PRKDC-205ENST00000535375 B5MCH6 92 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 ALG1L2C9J202 215 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 RECQL4O94761 1208 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 MTNR1BP49286 362 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 AMPD3Q01432 767 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 TUBA3CQ13748 450 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 FAM50AQ14320 339 aaKnown RBP6.9□□□□□ -1.3
PRKDC-205ENST00000535375 MST1LQ2TV78 715 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 TUBA3EQ6PEY2 450 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 PRPF38AQ8NAV1 312 aaKnown RBP6.9□□□□□ -1.3
PRKDC-205ENST00000535375 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.9□□□□□ -1.3
PRKDC-205ENST00000535375 CACTINQ8WUQ7 758 aaKnown RBP6.9□□□□□ -1.3
PRKDC-205ENST00000535375 BCO1Q9HAY6 547 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 MKS1Q9NXB0 559 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 CEP72Q9P209 647 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 EIF2B4Q9UI10 523 aaKnown RBP6.9□□□□□ -1.3
PRKDC-205ENST00000535375 DNM3Q9UQ16 869 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 REXO2Q9Y3B8 237 aaKnown RBP6.9□□□□□ -1.3
PRKDC-205ENST00000535375 PCDHGA2Q9Y5H1 932 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 COL4A3BPQ9Y5P4 624 aa6.9□□□□□ -1.3
PRKDC-205ENST00000535375 ZNF202O95125 648 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 IBSPP21815 317 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-205ENST00000535375 ACAP2Q15057 778 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 VPS72Q15906 364 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 RABL3Q5HYI8 236 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 PRAMEF14Q5SWL7 426 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 SYDE2Q5VT97 1194 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 NAIF1Q69YI7 327 aaPredicted RBP6.89□□□□□ -1.31
PRKDC-205ENST00000535375 HTR3DQ70Z44 454 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 OR7D4Q8NG98 312 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 MTMR8Q96EF0 704 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 DMRT3Q9NQL9 472 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 POGKQ9P215 609 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 SRRDQ9UH36 339 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 TRPS1Q9UHF7 1281 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 SORCS3Q9UPU3 1222 aa6.89□□□□□ -1.31
PRKDC-205ENST00000535375 TRIM75PA6NK02 468 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 ADCY6O43306 1168 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 FAM20BO75063 409 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 MT-CO1P00395 513 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 AGXTP21549 392 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 MGAT1P26572 445 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 MCAMP43121 646 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 CDKN1CP49918 316 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-205ENST00000535375 TOB2Q14106 344 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-205ENST00000535375 C1QL3Q5VWW1 255 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 EFCAB12Q6NXP0 572 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 PQLC1Q8N2U9 271 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 LILRA3Q8N6C8 439 aaPredicted RBP6.88□□□□□ -1.31
PRKDC-205ENST00000535375 PPM1NQ8N819 430 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 OR52N2Q8NGI0 321 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 CPT1CQ8TCG5 803 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 SSH1Q8WYL5 1049 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 SLC2A13Q96QE2 648 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 LSM14BQ9BX40 385 aaKnown RBP6.88□□□□□ -1.31
PRKDC-205ENST00000535375 CPEB1Q9BZB8 566 aaKnown RBP6.88□□□□□ -1.31
PRKDC-205ENST00000535375 TRIM8Q9BZR9 551 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 PCDH12Q9NPG4 1184 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 SCOCQ9UIL1 159 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 MRFAP1Q9Y605 127 aa6.88□□□□□ -1.31
PRKDC-205ENST00000535375 TBKBP1A7MCY6 615 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 ENDOD1O94919 500 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 SCAF4O95104 1147 aaKnown RBP6.87□□□□□ -1.31
PRKDC-205ENST00000535375 PEX11BO96011 259 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 MYBL2P10244 700 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 IARSP41252 1262 aaKnown RBP6.87□□□□□ -1.31
PRKDC-205ENST00000535375 FLT3LGP49771 235 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 ABHD18Q0P651 414 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 FAM47AQ5JRC9 791 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 REPS2Q8NFH8 660 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 TFAP2CQ92754 450 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 CEP95Q96GE4 821 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 FAXDC2Q96IV6 333 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 NDC1Q9BTX1 674 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 SENP6Q9GZR1 1112 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-205ENST00000535375 ZNF277Q9NRM2 450 aaPredicted RBP6.87□□□□□ -1.31
PRKDC-205ENST00000535375 SAP30BPQ9UHR5 308 aaKnown RBP6.87□□□□□ -1.31
PRKDC-205ENST00000535375 TRHDEQ9UKU6 1024 aa6.87□□□□□ -1.31
PRKDC-205ENST00000535375 KLHL33A6NCF5 533 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 FAM171A2A8MVW0 826 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 XPOTO43592 962 aaKnown RBP6.86□□□□□ -1.31
PRKDC-205ENST00000535375 KATNA1O75449 491 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 MCM7P33993 719 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 EVA1CP58658 441 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 MTMR1Q13613 665 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 ABCB5Q2M3G0 1257 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 ANKS6Q68DC2 871 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 Q6ZVL8 140 aa6.86□□□□□ -1.31
PRKDC-205ENST00000535375 TRMT2AQ8IZ69 625 aaKnown RBP6.86□□□□□ -1.31
PRKDC-205ENST00000535375 Q8N1X5 172 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms