RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 ZNF396Q96N95 335 aaPredicted RBP15.19■□□□□ 0.02
TMEM258-203ENST00000535297 UHRF1Q96T88 793 aaPredicted RBP15.19■□□□□ 0.02
TMEM258-203ENST00000535297 NTPCRQ9BSD7 190 aaKnown RBP15.19■□□□□ 0.02
TMEM258-203ENST00000535297 IGFLR1Q9H665 355 aa15.19■□□□□ 0.02
TMEM258-203ENST00000535297 TLE6Q9H808 572 aa15.19■□□□□ 0.02
TMEM258-203ENST00000535297 XIRP2A4UGR9 3374 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 H0YCG3 227 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 H3BQ06 376 aaPredicted RBP15.18■□□□□ 0.02
TMEM258-203ENST00000535297 TBX10O75333 385 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 ZSCAN22P10073 491 aaPredicted RBP15.18■□□□□ 0.02
TMEM258-203ENST00000535297 AKAP5P24588 427 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 LTBRP36941 435 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 SMTNP53814 917 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 RAD51AP2Q09MP3 1159 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 GRIK3Q13003 919 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 DUSP6Q16828 381 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 ARSHQ5FYA8 562 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 EEF1DP3Q658K8 133 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 TAS1R3Q7RTX0 852 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 TMC7Q7Z402 723 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 COLGALT2Q8IYK4 626 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 KRI1Q8N9T8 703 aaKnown RBP15.18■□□□□ 0.02
TMEM258-203ENST00000535297 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.18■□□□□ 0.02
TMEM258-203ENST00000535297 BCL7CQ8WUZ0 217 aaPredicted RBP15.18■□□□□ 0.02
TMEM258-203ENST00000535297 LARP4BQ92615 738 aaKnown RBP15.18■□□□□ 0.02
TMEM258-203ENST00000535297 EPSTI1Q96J88 318 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 RPS6KC1Q96S38 1066 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 MRPL4Q9BYD3 311 aaKnown RBP15.18■□□□□ 0.02
TMEM258-203ENST00000535297 ZBP1Q9H171 429 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 LARSQ9P2J5 1176 aaKnown RBP15.18■□□□□ 0.02
TMEM258-203ENST00000535297 STK17AQ9UEE5 414 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 CCDC39Q9UFE4 941 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 PARP2Q9UGN5 583 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 FAM50BQ9Y247 325 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 TNFSF13BQ9Y275 285 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 USP20Q9Y2K6 914 aa15.18■□□□□ 0.02
TMEM258-203ENST00000535297 SFI1A8K8P3 1242 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 SLC16A4O15374 487 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 LINC01565O15544 149 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 RECQL4O94761 1208 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 ALDH2P05091 517 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 SCP2P22307 547 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 NDUFV1P49821 464 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 STRN3Q13033 797 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 MCM6Q14566 821 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 STK38Q15208 465 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 SPECC1Q5M775 1068 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 PTCRAQ6ISU1 281 aaPredicted RBP15.17■□□□□ 0.02
TMEM258-203ENST00000535297 USP49Q70CQ1 688 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 RBM23Q86U06 439 aaKnown RBP15.17■□□□□ 0.02
TMEM258-203ENST00000535297 LINC00301Q8NCQ3 95 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 TMEM161BQ8NDZ6 487 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 GSTCDQ8NEC7 633 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 KCNN1Q92952 543 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 CLIC6Q96NY7 704 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 ACO2Q99798 780 aaKnown RBP15.17■□□□□ 0.02
TMEM258-203ENST00000535297 REEP2Q9BRK0 252 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 MIOSQ9NXC5 875 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 SNTG2Q9NY99 539 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 FAN1Q9Y2M0 1017 aa15.17■□□□□ 0.02
TMEM258-203ENST00000535297 NPHP3-ACAD11A0A0J9YXS1 232 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 GRXCR2A6NFK2 248 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 C2orf71A6NGG8 1288 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 HIDE1A8MVS5 230 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 NRP1O14786 923 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 NR1I2O75469 434 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 FAM13AO94988 1023 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 YEATS4O95619 227 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 GLP2RO95838 553 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 F13A1P00488 732 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 KRT18P05783 430 aaKnown RBP15.16■□□□□ 0.02
TMEM258-203ENST00000535297 SRGAP2BP0DMP2 458 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 CTSAP10619 480 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 MAPTP10636 758 aaKnown RBP15.16■□□□□ 0.02
TMEM258-203ENST00000535297 ZNF131P52739 623 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 NCKAP1LP55160 1127 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
TMEM258-203ENST00000535297 DLX2Q07687 328 aaPredicted RBP15.16■□□□□ 0.02
TMEM258-203ENST00000535297 GIT2Q14161 759 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 DHX8Q14562 1220 aaKnown RBP15.16■□□□□ 0.02
TMEM258-203ENST00000535297 ZNF568Q3ZCX4 644 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 VPS52Q8N1B4 723 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 MRPL43Q8N983 215 aaKnown RBP15.16■□□□□ 0.02
TMEM258-203ENST00000535297 CDT1Q9H211 546 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 PTPRHQ9HD43 1115 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 MARCH5Q9NX47 278 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 KLK14Q9P0G3 267 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 CD207Q9UJ71 328 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 PRG3Q9Y2Y8 225 aaPredicted RBP15.16■□□□□ 0.02
TMEM258-203ENST00000535297 IRAK3Q9Y616 596 aa15.16■□□□□ 0.02
TMEM258-203ENST00000535297 TNFRSF10AO00220 468 aa15.15■□□□□ 0.02
TMEM258-203ENST00000535297 PER2O15055 1255 aa15.15■□□□□ 0.02
TMEM258-203ENST00000535297 SPTLC2O15270 562 aa15.15■□□□□ 0.02
TMEM258-203ENST00000535297 PPP6R2O75170 966 aa15.15■□□□□ 0.02
TMEM258-203ENST00000535297 TBCAO75347 108 aaKnown RBP15.15■□□□□ 0.02
TMEM258-203ENST00000535297 BRD1O95696 1058 aa15.15■□□□□ 0.02
TMEM258-203ENST00000535297 PROZP22891 400 aa15.15■□□□□ 0.02
TMEM258-203ENST00000535297 DDIT3P35638 169 aa15.15■□□□□ 0.02
TMEM258-203ENST00000535297 OR1G1P47890 313 aa15.15■□□□□ 0.02
TMEM258-203ENST00000535297 SMAD4Q13485 552 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms