RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 CBX2Q14781 532 aaPredicted RBP9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 TPRNQ4KMQ1 711 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 CDCA2Q69YH5 1023 aaPredicted RBP9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 SLC27A1Q6PCB7 646 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 DEPTORQ8TB45 409 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 SNX29Q8TEQ0 813 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 BSNDQ8WZ55 320 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 SUSD6Q92537 303 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 TMX3Q96JJ7 454 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 ZFP42Q96MM3 310 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 GBP4Q96PP9 640 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 VN1R3Q9BXE9 311 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 RAB34Q9BZG1 259 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 S1PR5Q9H228 398 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 DDX19AQ9NUU7 478 aaKnown RBP9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 MIOSQ9NXC5 875 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 KLK14Q9P0G3 267 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 LRWD1Q9UFC0 647 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 PARP2Q9UGN5 583 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 CDH22Q9UJ99 828 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 KIAA1024Q9UPX6 916 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 GIT1Q9Y2X7 761 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 SPDYE4A6NLX3 237 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 PP2D1A8MPX8 630 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 PRR33A8MZF0 331 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 H3BQV1 296 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 C2CD2LO14523 706 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 PRKCBP05771 671 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 GJB2P29033 226 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 NAMPTP43490 491 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 PRPF4BQ13523 1007 aaKnown RBP9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 PPP2R5AQ15172 486 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 PTPN14Q15678 1187 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 MAPK6Q16659 721 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 RARS2Q5T160 578 aaKnown RBP9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 CES5AQ6NT32 575 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 SASS6Q6UVJ0 657 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 PPP4R3CPQ6ZMV5 832 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 CLEC17AQ6ZS10 378 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 COLGALT2Q8IYK4 626 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 IFT74Q96LB3 600 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 PRIMPOLQ96LW4 560 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 RPS6KC1Q96S38 1066 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 KIFC3Q9BVG8 833 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 HERC2P3Q9BVR0 1158 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 EMILIN2Q9BXX0 1053 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 C2orf40Q9H1Z8 148 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 BHMT2Q9H2M3 363 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 POLD4Q9HCU8 107 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 MARCH5Q9NX47 278 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 STK39Q9UEW8 545 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 IRAK3Q9Y616 596 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 STK24Q9Y6E0 443 aa9.43□□□□□ -0.9
SFSWAP-202ENST00000535202 A0A1B0GUA9 196 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 TTLL13PA6NNM8 815 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 E9PMD0 336 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 LAD1O00515 517 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 N4BP3O15049 544 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 INPPL1O15357 1258 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 NR1I2O75469 434 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 SOD2P04179 222 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 URODP06132 367 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 WEE2P0C1S8 567 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 EPCAMP16422 314 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 KLRC2P26717 231 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 DDIT3P35638 169 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 SLC20A2Q08357 652 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 DSC1Q08554 894 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 GRIK3Q13003 919 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 PDIA5Q14554 519 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 ZRSR1Q15695 479 aaKnown RBP9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 IL17AQ16552 155 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 FAM187BQ17R55 369 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 HERC4Q5GLZ8 1057 aaPredicted RBP9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 KRT79Q5XKE5 535 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 CABP7Q86V35 215 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 PPFIBP1Q86W92 1011 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 C12orf76Q8N812 135 aaPredicted RBP9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 IGSF22Q8N9C0 903 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 SLC22A17Q8WUG5 538 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 KLHL5Q96PQ7 755 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 ADAM7Q9H2U9 754 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 FZD8Q9H461 694 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 POMKQ9H5K3 350 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 PDZD7Q9H5P4 517 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 MRPL17Q9NRX2 175 aaKnown RBP9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 DZANK1Q9NVP4 752 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 SMC3Q9UQE7 1217 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 USP20Q9Y2K6 914 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 BDP1A6H8Y1 2624 aa9.42□□□□□ -0.9
SFSWAP-202ENST00000535202 ZMYM2Q9UBW7 1377 aa9.41□□□□□ -0.9
SFSWAP-202ENST00000535202 PLXNA3P51805 1871 aa9.41□□□□□ -0.9
SFSWAP-202ENST00000535202 F8W810 466 aa9.41□□□□□ -0.9
SFSWAP-202ENST00000535202 ACKR2O00590 384 aa9.41□□□□□ -0.9
SFSWAP-202ENST00000535202 EDN1P05305 212 aa9.41□□□□□ -0.9
SFSWAP-202ENST00000535202 CNPP09543 421 aaKnown RBP9.41□□□□□ -0.9
SFSWAP-202ENST00000535202 CDC25AP30304 524 aa9.41□□□□□ -0.9
SFSWAP-202ENST00000535202 PRPHP41219 470 aa9.41□□□□□ -0.9
SFSWAP-202ENST00000535202 MTHFRP42898 656 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms