RNA–Protein interactions for RNA: ENST00000535177.1

CYB561A3-205, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,026 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-205ENST00000535177 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.7■□□□□ 0.12e-6■■■■□ 21.1
CYB561A3-205ENST00000535177 RBM43Q6ZSC3 357 aaKnown RBP15.7■□□□□ 0.1
CYB561A3-205ENST00000535177 FAM43BQ6ZT52 329 aaPredicted RBP15.7■□□□□ 0.1
CYB561A3-205ENST00000535177 TRIML1Q8N9V2 468 aa15.7■□□□□ 0.1
CYB561A3-205ENST00000535177 SCFD1Q8WVM8 642 aa15.7■□□□□ 0.1
CYB561A3-205ENST00000535177 CPB2Q96IY4 423 aa15.7■□□□□ 0.1
CYB561A3-205ENST00000535177 ACCSQ96QU6 501 aa15.7■□□□□ 0.1
CYB561A3-205ENST00000535177 CHST12Q9NRB3 414 aa15.7■□□□□ 0.1
CYB561A3-205ENST00000535177 EXOC7Q9UPT5 735 aa15.7■□□□□ 0.1
CYB561A3-205ENST00000535177 ZMYM2Q9UBW7 1377 aa15.7■□□□□ 0.1
CYB561A3-205ENST00000535177 ABHD14A-ACY1A0A1B0GW23 586 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 TTLL13PA6NNM8 815 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 N4BP3O15049 544 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 PRPF6O94906 941 aaKnown RBP15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 KIF20AO95235 890 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 GJB5O95377 273 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 PIGRP01833 764 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 HOXA11P31270 313 aaPredicted RBP15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 KCNJ6P48051 423 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 LIG4P49917 911 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 KCNA1Q09470 495 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 MORC3Q14149 939 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 ISM2Q6H9L7 571 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 ZPBP2Q6X784 338 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 SMYD4Q8IYR2 804 aaPredicted RBP15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 MYOCDQ8IZQ8 938 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 CCDC51Q96ER9 411 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 TARS2Q9BW92 718 aaKnown RBP15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 PDZD7Q9H5P4 517 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 TMEM206Q9H813 350 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 RAPGEFL1Q9UHV5 662 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 USP20Q9Y2K6 914 aa15.69■□□□□ 0.1
CYB561A3-205ENST00000535177 MGEA5O60502 916 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 ZSCAN20P17040 1043 aaPredicted RBP15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 IKBKEQ14164 716 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 DSC3Q14574 896 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 ZNF568Q3ZCX4 644 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 COBLL1Q53SF7 1204 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 TWF2Q6IBS0 349 aaKnown RBP15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 NELFCDQ8IXH7 590 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 SYCP3Q8IZU3 236 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 GUF1Q8N442 669 aaKnown RBP15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 ZNF507Q8TCN5 953 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 LINC01599Q8WXQ3 324 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 RAD9AQ99638 391 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 ACO2Q99798 780 aaKnown RBP15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 ADAM2Q99965 735 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 TSPYL2Q9H2G4 693 aaPredicted RBP15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 ANKFY1Q9P2R3 1169 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 TNFSF13BQ9Y275 285 aa15.68■□□□□ 0.1
CYB561A3-205ENST00000535177 A0A1B0GUA9 196 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 LINC01553A4QN01 128 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 EFCAB14O75071 495 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 TOM1L1O75674 476 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 COL9A1P20849 921 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 BMP6P22004 513 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 HOXD13P35453 343 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 ERVK-21P61565 698 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 SKIV2LQ15477 1246 aaKnown RBP15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 KNOP1Q1ED39 458 aaKnown RBP15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 SLC39A4Q6P5W5 647 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 SLC27A1Q6PCB7 646 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 MPZL3Q6UWV2 235 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 CDR2LQ86X02 465 aaPredicted RBP15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 GDPD5Q8WTR4 605 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 ADPGKQ9BRR6 497 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 ZBED2Q9BTP6 218 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 C1orf112Q9NSG2 853 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 MAPK8IP1Q9UQF2 711 aa15.67■□□□□ 0.1
CYB561A3-205ENST00000535177 PROZP22891 400 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 PPP1R2P41236 205 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 PRCPP42785 496 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 RAB27AP51159 221 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 STIM1Q13586 685 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 NOLC1Q14978 699 aaKnown RBP eCLIP15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 DCAF4L1Q3SXM0 396 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 UBXN11Q5T124 520 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 EEF1DP3Q658K8 133 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 FAM117BQ6P1L5 589 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 APBB1IPQ7Z5R6 666 aaPredicted RBP15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 TRAIPQ9BWF2 469 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 TRIM6Q9C030 488 aaPredicted RBP15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 GBP3Q9H0R5 595 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 CDT1Q9H211 546 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 IKZF4Q9H2S9 585 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 PTPRHQ9HD43 1115 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 RGS18Q9NS28 235 aa15.66■□□□□ 0.1
CYB561A3-205ENST00000535177 BRWD1Q9NSI6 2320 aa15.65■□□□□ 0.1
CYB561A3-205ENST00000535177 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.65■□□□□ 0.1
CYB561A3-205ENST00000535177 TISP43B9A030 160 aa15.65■□□□□ 0.1
CYB561A3-205ENST00000535177 ABLIM1O14639 778 aa15.65■□□□□ 0.1
CYB561A3-205ENST00000535177 CLDN3O15551 220 aa15.65■□□□□ 0.1
CYB561A3-205ENST00000535177 LETM1O95202 739 aaPredicted RBP15.65■□□□□ 0.1
CYB561A3-205ENST00000535177 NPTXRO95502 500 aa15.65■□□□□ 0.1
CYB561A3-205ENST00000535177 MATR3P43243 847 aaKnown RBP eCLIP15.65■□□□□ 0.1
CYB561A3-205ENST00000535177 HTRA4P83105 476 aaPredicted RBP15.65■□□□□ 0.1
CYB561A3-205ENST00000535177 MCL1Q07820 350 aa15.65■□□□□ 0.1
CYB561A3-205ENST00000535177 SASS6Q6UVJ0 657 aa15.65■□□□□ 0.1
CYB561A3-205ENST00000535177 SLC24A5Q71RS6 500 aa15.65■□□□□ 0.1
CYB561A3-205ENST00000535177 HS2ST1Q7LGA3 356 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms