RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 KRTAP29-1A8MX34 341 aaPredicted RBP4.79□□□□□ -1.64
USP48-215ENST00000534705 MASP2O00187 686 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 TOX4O94842 621 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 GAAP10253 952 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 HNRNPLP14866 589 aaKnown RBP eCLIP4.79□□□□□ -1.64
USP48-215ENST00000534705 KIR2DL3P43628 341 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 WNT3AP56704 352 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 PPARAQ07869 468 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 CNGB1Q14028 1251 aaPredicted RBP4.79□□□□□ -1.64
USP48-215ENST00000534705 SAFB2Q14151 953 aaKnown RBP eCLIP4.79□□□□□ -1.64
USP48-215ENST00000534705 PITRM1Q5JRX3 1037 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 SPTY2D1Q68D10 685 aaPredicted RBP4.79□□□□□ -1.64
USP48-215ENST00000534705 ANKRD53Q8N9V6 530 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 WDR66Q8TBY9 1149 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 UIMC1Q96RL1 719 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 GPHA2Q96T91 129 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 FDXACB1Q9BRP7 624 aaPredicted RBP4.79□□□□□ -1.64
USP48-215ENST00000534705 NRDE2Q9H7Z3 1164 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 AGO3Q9H9G7 860 aaKnown RBP4.79□□□□□ -1.64
USP48-215ENST00000534705 TOPORSQ9NS56 1045 aaPredicted RBP4.79□□□□□ -1.64
USP48-215ENST00000534705 GPRC5BQ9NZH0 403 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 ZNHIT2Q9UHR6 403 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 CDY2AQ9Y6F7 541 aa4.79□□□□□ -1.64
USP48-215ENST00000534705 A0A1W2PR48 441 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 A0A1W2PRX2 142 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 LY86O95711 162 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 HMGB1P09429 215 aaKnown RBP4.78□□□□□ -1.64
USP48-215ENST00000534705 PROZP22891 400 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 CANXP27824 592 aaKnown RBP4.78□□□□□ -1.64
USP48-215ENST00000534705 CD38P28907 300 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 C21orf58P58505 322 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 MRPS9P82933 396 aaKnown RBP4.78□□□□□ -1.64
USP48-215ENST00000534705 TMPRSS15P98073 1019 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 SPIDRQ14159 915 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 PDCD1Q15116 288 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.78□□□□□ -1.64
USP48-215ENST00000534705 GJC2Q5T442 439 aaPredicted RBP4.78□□□□□ -1.64
USP48-215ENST00000534705 IQSEC1Q6DN90 963 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 CCDC62Q6P9F0 684 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 LMBR1LQ6UX01 489 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 NECAB2Q7Z6G3 386 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 TMEM176AQ96HP8 235 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 KCTD10Q9H3F6 313 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 IL23AQ9NPF7 189 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 PACSIN3Q9UKS6 424 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 KIF27Q86VH2 1401 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 SBNO2Q9Y2G9 1366 aa4.78□□□□□ -1.64
USP48-215ENST00000534705 RPS6KA4O75676 772 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 MTHFD2P13995 350 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 SLC25A3Q00325 362 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 TRIM25Q14258 630 aaKnown RBP4.77□□□□□ -1.65
USP48-215ENST00000534705 UGT8Q16880 541 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 KRT40Q6A162 431 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 GAREM2Q75VX8 874 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 TAS1R1Q7RTX1 841 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 MRGPREQ86SM8 312 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 GLCCI1Q86VQ1 547 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 CMTM4Q8IZR5 234 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 PIK3C3Q8NEB9 887 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 GPR150Q8NGU9 434 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 ATL2Q8NHH9 583 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 LMBR1Q8WVP7 490 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 ANO3Q9BYT9 981 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 HECAQ9UBI9 543 aaPredicted RBP4.77□□□□□ -1.65
USP48-215ENST00000534705 USP18Q9UMW8 372 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 PHLDB1Q86UU1 1377 aa4.77□□□□□ -1.65
USP48-215ENST00000534705 GOLGA8BA8MQT2 603 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 ALDH1A2O94788 518 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 PRKD3O94806 890 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 LTA4HP09960 611 aaKnown RBP4.76□□□□□ -1.65
USP48-215ENST00000534705 CLEC2LP0C7M8 214 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 CDK4P11802 303 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 ERVK-21P61565 698 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 CD69Q07108 199 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 C19orf54Q5BKX5 351 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 MBNL2Q5VZF2 373 aaKnown RBP4.76□□□□□ -1.65
USP48-215ENST00000534705 MFSD5Q6N075 450 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 LHFPL2Q6ZUX7 228 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 GSPT2Q8IYD1 628 aaKnown RBP4.76□□□□□ -1.65
USP48-215ENST00000534705 MIEF2Q96C03 454 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 AHCYL2Q96HN2 611 aaKnown RBP4.76□□□□□ -1.65
USP48-215ENST00000534705 TCF25Q9BQ70 676 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 ENKD1Q9H0I2 346 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 PUS7LQ9H0K6 701 aaKnown RBP4.76□□□□□ -1.65
USP48-215ENST00000534705 EVLQ9UI08 416 aaPredicted RBP4.76□□□□□ -1.65
USP48-215ENST00000534705 RCAN3Q9UKA8 241 aa4.76□□□□□ -1.65
USP48-215ENST00000534705 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.76□□□□□ -1.65
USP48-215ENST00000534705 ADCY10Q96PN6 1610 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 IQGAP2Q13576 1575 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 UBE2QL1A1L167 161 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 ZAR1LA6NP61 321 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 TMEM127O75204 238 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 PPFIA4O75335 1185 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 ERBB2P04626 1255 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 MAN2A2P49641 1150 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 MGAT5Q09328 741 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 ANO4Q32M45 955 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 CT83Q5H943 113 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 FAM111BQ6SJ93 734 aa4.75□□□□□ -1.65
USP48-215ENST00000534705 SYNE4Q8N205 404 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms