RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 ARHGEF37A1IGU5 675 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 CIITAP33076 1130 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 SHMT1P34896 483 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 HNRNPH2P55795 449 aaKnown RBP18.34■□□□□ 0.53
PHRF1-206ENST00000534320 VSNL1P62760 191 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 PDCD7Q8N8D1 485 aaKnown RBP18.34■□□□□ 0.53
PHRF1-206ENST00000534320 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.34■□□□□ 0.53
PHRF1-206ENST00000534320 FMN2Q9NZ56 1722 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 GNAT1P11488 350 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 GALCP54803 685 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 RNASELQ05823 741 aaKnown RBP18.34■□□□□ 0.53
PHRF1-206ENST00000534320 XRRA1Q6P2D8 792 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 DSTYKQ6XUX3 929 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 TAF1DQ9H5J8 278 aaPredicted RBP18.34■□□□□ 0.53
PHRF1-206ENST00000534320 NCAPHQ15003 741 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 RNF25Q96BH1 459 aaPredicted RBP18.34■□□□□ 0.53
PHRF1-206ENST00000534320 TAAR1Q96RJ0 339 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 GINM1Q9NU53 330 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 HACL1Q9UJ83 578 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 MYO1CO00159 1063 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 ANKS1AQ92625 1134 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 ASNSD1Q9NWL6 643 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 IP6K2Q9UHH9 426 aa18.34■□□□□ 0.53
PHRF1-206ENST00000534320 NFAT5O94916 1531 aa18.33■□□□□ 0.53
PHRF1-206ENST00000534320 PRKCBP05771 671 aa18.33■□□□□ 0.53
PHRF1-206ENST00000534320 PRKCEQ02156 737 aa18.33■□□□□ 0.53
PHRF1-206ENST00000534320 BEST2Q8NFU1 509 aa18.33■□□□□ 0.53
PHRF1-206ENST00000534320 SEPT1Q8WYJ6 367 aa18.33■□□□□ 0.53
PHRF1-206ENST00000534320 FAM163AQ96GL9 167 aaPredicted RBP18.33■□□□□ 0.53
PHRF1-206ENST00000534320 UNC45AQ9H3U1 944 aa18.33■□□□□ 0.53
PHRF1-206ENST00000534320 SAT1P21673 171 aa18.33■□□□□ 0.52
PHRF1-206ENST00000534320 NAB2Q15742 525 aa18.33■□□□□ 0.52
PHRF1-206ENST00000534320 TTI2Q6NXR4 508 aa18.33■□□□□ 0.52
PHRF1-206ENST00000534320 PYROXD1Q8WU10 500 aa18.33■□□□□ 0.52
PHRF1-206ENST00000534320 OATP04181 439 aa18.33■□□□□ 0.52
PHRF1-206ENST00000534320 TTC13Q8NBP0 860 aa18.33■□□□□ 0.52
PHRF1-206ENST00000534320 RUSC1Q9BVN2 902 aa18.33■□□□□ 0.52
PHRF1-206ENST00000534320 CHUKO15111 745 aa18.33■□□□□ 0.52
PHRF1-206ENST00000534320 ACOT2P49753 483 aa18.33■□□□□ 0.52
PHRF1-206ENST00000534320 REXO1L1PQ8IX06 675 aa18.33■□□□□ 0.52
PHRF1-206ENST00000534320 RNPC3Q96LT9 517 aaKnown RBP18.33■□□□□ 0.52
PHRF1-206ENST00000534320 LRRC1Q9BTT6 524 aa18.33■□□□□ 0.52
PHRF1-206ENST00000534320 TMX2Q9Y320 296 aa18.33■□□□□ 0.52
PHRF1-206ENST00000534320 EMC2Q15006 297 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 RHOT1Q8IXI2 618 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 SCYL1Q96KG9 808 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 FAM187AA6NFU0 413 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 M0QYV0 167 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 PSMC1P62191 440 aaKnown RBP18.32■□□□□ 0.52
PHRF1-206ENST00000534320 PPP6R3Q5H9R7 873 aaPredicted RBP18.32■□□□□ 0.52
PHRF1-206ENST00000534320 DNAAF3Q8N9W5 541 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 DRC3Q9H069 523 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 ANKEF1Q9NU02 776 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 MORC2Q9Y6X9 1032 aaPredicted RBP18.32■□□□□ 0.52
PHRF1-206ENST00000534320 ATP8B3O60423 1300 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 MT-ND3P03897 115 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 SRGAP2BP0DMP2 458 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 TFDP2Q14188 446 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 KLHDC7AQ5VTJ3 777 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 LRP10Q7Z4F1 713 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 SLC35G2Q8TBE7 412 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 SYN2Q92777 582 aaPredicted RBP18.32■□□□□ 0.52
PHRF1-206ENST00000534320 NCAPGQ9BPX3 1015 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 DYNC1I2Q13409 638 aaKnown RBP18.32■□□□□ 0.52
PHRF1-206ENST00000534320 TWF2Q6IBS0 349 aaKnown RBP18.32■□□□□ 0.52
PHRF1-206ENST00000534320 SCYL3Q8IZE3 742 aa18.32■□□□□ 0.52
PHRF1-206ENST00000534320 SUCLA2Q9P2R7 463 aaPredicted RBP18.32■□□□□ 0.52
PHRF1-206ENST00000534320 ABT1Q9ULW3 272 aaKnown RBP18.32■□□□□ 0.52
PHRF1-206ENST00000534320 HOXA10P31260 410 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-206ENST00000534320 CCDC92Q53HC0 331 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-206ENST00000534320 CDKAL1Q5VV42 579 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.31■□□□□ 0.52
PHRF1-206ENST00000534320 COG1Q8WTW3 980 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 SAYSD1Q9NPB0 183 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 SERPINB6P35237 376 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 KLHL29Q96CT2 875 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 IQCA1LA6NCM1 817 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 HUS1O60921 280 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 NPEPPSP55786 919 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 SNRPFP62306 86 aaKnown RBP18.31■□□□□ 0.52
PHRF1-206ENST00000534320 CAV1Q03135 178 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 DDR1Q08345 913 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 ARHGEF6Q15052 776 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 CCDC137Q6PK04 289 aaKnown RBP18.31■□□□□ 0.52
PHRF1-206ENST00000534320 MS4A14Q96JA4 679 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 SPON1Q9HCB6 807 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 SLIT3O75094 1523 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 SCP2P22307 547 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 MXD4Q14582 209 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-206ENST00000534320 TTC39CQ8N584 583 aa18.31■□□□□ 0.52
PHRF1-206ENST00000534320 GCOM2Q9BZD3 368 aaPredicted RBP18.31■□□□□ 0.52
PHRF1-206ENST00000534320 ERVK-24P63145 666 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 DNAJC7Q99615 494 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 DDX4Q9NQI0 724 aaKnown RBP18.3■□□□□ 0.52
PHRF1-206ENST00000534320 PLAGL2Q9UPG8 496 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 INPP1P49441 399 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.3■□□□□ 0.52
PHRF1-206ENST00000534320 BZW1Q7L1Q6 419 aaKnown RBP18.3■□□□□ 0.52
PHRF1-206ENST00000534320 CHST13Q8NET6 341 aa18.3■□□□□ 0.52
PHRF1-206ENST00000534320 CENPKQ9BS16 269 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms