RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 KRT25Q7Z3Z0 450 aa16.65■□□□□ 0.26
CTSB-230ENST00000534149 HDAC7Q8WUI4 952 aa16.65■□□□□ 0.26
CTSB-230ENST00000534149 FAM20AQ96MK3 541 aa16.65■□□□□ 0.26
CTSB-230ENST00000534149 GPR62Q9BZJ7 368 aa16.65■□□□□ 0.26
CTSB-230ENST00000534149 PRKD2Q9BZL6 878 aa16.65■□□□□ 0.26
CTSB-230ENST00000534149 FOXQ1Q9C009 403 aa16.65■□□□□ 0.26
CTSB-230ENST00000534149 NXF3Q9H4D5 531 aaKnown RBP16.65■□□□□ 0.26
CTSB-230ENST00000534149 ZDHHC7Q9NXF8 308 aa16.65■□□□□ 0.26
CTSB-230ENST00000534149 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.65■□□□□ 0.26
CTSB-230ENST00000534149 RGL1Q9NZL6 768 aa16.65■□□□□ 0.26
CTSB-230ENST00000534149 SIT1Q9Y3P8 196 aa16.65■□□□□ 0.26
CTSB-230ENST00000534149 NUMBLQ9Y6R0 609 aa16.65■□□□□ 0.26
CTSB-230ENST00000534149 MIA3Q5JRA6 1907 aa16.64■□□□□ 0.26
CTSB-230ENST00000534149 GPR179Q6PRD1 2367 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 ANHXE9PGG2 379 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 INO80B-WBP1J3KQ70 363 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 CPLX1O14810 134 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 ASAP2O43150 1006 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 NR1I2O75469 434 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 PAPLNO95428 1278 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 PSMA5P28066 241 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 AXLP30530 894 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 PTENP60484 403 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 TOB2Q14106 344 aaPredicted RBP16.64■□□□□ 0.25
CTSB-230ENST00000534149 XKR9Q5GH70 373 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 DCLRE1AQ6PJP8 1040 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 ZC3H14Q6PJT7 736 aaKnown RBP16.64■□□□□ 0.25
CTSB-230ENST00000534149 DGLUCYQ7Z3D6 616 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 C1orf210Q8IVY1 113 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 C4orf19Q8IY42 314 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 RABGGTAQ92696 567 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 CCDC51Q96ER9 411 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 DYDC2Q96IM9 177 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 MTRQ99707 1265 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 COLEC11Q9BWP8 271 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 CSRNP2Q9H175 543 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 XPNPEP1Q9NQW7 623 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 KCNJ14Q9UNX9 436 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 NCOR2Q9Y618 2525 aa16.64■□□□□ 0.25
CTSB-230ENST00000534149 COL4A3Q01955 1670 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 POTEMA6NI47 508 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 LRRN2O75325 713 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 GLULP15104 373 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 AKAP5P24588 427 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 CYP4A11Q02928 519 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 CTTNQ14247 550 aaKnown RBP16.63■□□□□ 0.25
CTSB-230ENST00000534149 EPHA7Q15375 998 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 USP41Q3LFD5 358 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 NCAPH2Q6IBW4 605 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 GALNT17Q6IS24 598 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 LILRA6Q6PI73 481 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 OTUD6AQ7L8S5 288 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 PJA1Q8NG27 643 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 HAS1Q92839 578 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 LARP6Q9BRS8 491 aaKnown RBP16.63■□□□□ 0.25
CTSB-230ENST00000534149 RPP25Q9BUL9 199 aaKnown RBP16.63■□□□□ 0.25
CTSB-230ENST00000534149 TRIM6Q9C030 488 aaPredicted RBP16.63■□□□□ 0.25
CTSB-230ENST00000534149 SLC2A4RGQ9NR83 387 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.63■□□□□ 0.25
CTSB-230ENST00000534149 FNIP2Q9P278 1114 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 CACNG4Q9UBN1 327 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 ADAM28Q9UKQ2 775 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 GIT1Q9Y2X7 761 aa16.63■□□□□ 0.25
CTSB-230ENST00000534149 CCDC194A0A1B0GVG4 234 aa16.62■□□□□ 0.25
CTSB-230ENST00000534149 CCNT1O60563 726 aaKnown RBP16.62■□□□□ 0.25
CTSB-230ENST00000534149 ZMYND10O75800 440 aa16.62■□□□□ 0.25
CTSB-230ENST00000534149 ARF4P18085 180 aaPredicted RBP16.62■□□□□ 0.25
CTSB-230ENST00000534149 FSHRP23945 695 aa16.62■□□□□ 0.25
CTSB-230ENST00000534149 MBTD1Q05BQ5 628 aa16.62■□□□□ 0.25
CTSB-230ENST00000534149 NCBP1Q09161 790 aaKnown RBP16.62■□□□□ 0.25
CTSB-230ENST00000534149 STK3Q13188 491 aa16.62■□□□□ 0.25
CTSB-230ENST00000534149 PCBP1Q15365 356 aaKnown RBP eCLIP16.62■□□□□ 0.25
CTSB-230ENST00000534149 AMHR2Q16671 573 aa16.62■□□□□ 0.25
CTSB-230ENST00000534149 PPP4R3AQ6IN85 833 aa16.62■□□□□ 0.25
CTSB-230ENST00000534149 PRSS55Q6UWB4 352 aaPredicted RBP16.62■□□□□ 0.25
CTSB-230ENST00000534149 NEK8Q86SG6 692 aa16.62■□□□□ 0.25
CTSB-230ENST00000534149 CDR2LQ86X02 465 aaPredicted RBP16.62■□□□□ 0.25
CTSB-230ENST00000534149 DCLK2Q8N568 766 aa16.62■□□□□ 0.25
CTSB-230ENST00000534149 GSTCDQ8NEC7 633 aa16.62■□□□□ 0.25
CTSB-230ENST00000534149 ASAP3Q8TDY4 903 aa16.62■□□□□ 0.25
CTSB-230ENST00000534149 B4GALT5O43286 388 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 MARCH6O60337 910 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 C1RP00736 705 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 GCFC2P16383 781 aaKnown RBP16.61■□□□□ 0.25
CTSB-230ENST00000534149 GPC5P78333 572 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 NTHL1P78549 312 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 CAPSQ13938 189 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 TFDP1Q14186 410 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 MXD4Q14582 209 aaPredicted RBP16.61■□□□□ 0.25
CTSB-230ENST00000534149 RTP2Q5QGT7 225 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 PARM1Q6UWI2 310 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 RUFY3Q7L099 469 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 CENPQQ7L2Z9 268 aaPredicted RBP16.61■□□□□ 0.25
CTSB-230ENST00000534149 GRASPQ7Z6J2 395 aaPredicted RBP16.61■□□□□ 0.25
CTSB-230ENST00000534149 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 IFNLR1Q8IU57 520 aaPredicted RBP16.61■□□□□ 0.25
CTSB-230ENST00000534149 HACE1Q8IYU2 909 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 FAM177A1Q8N128 213 aaPredicted RBP16.61■□□□□ 0.25
CTSB-230ENST00000534149 RUBCNQ92622 972 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 FGF14Q92915 247 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms