RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 FOXD4L4Q8WXT5 416 aaPredicted RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 SUSD6Q92537 303 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 EPSTI1Q96J88 318 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 CCDC43Q96MW1 224 aaKnown RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 CLIC6Q96NY7 704 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 NFKBIZQ9BYH8 718 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 GOLGA2P5Q9HBQ8 144 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 BLOC1S4Q9NUP1 217 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 PARP2Q9UGN5 583 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 LZTS1Q9Y250 596 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 GDAQ9Y2T3 454 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 VPS13AQ96RL7 3174 aa10.65□□□□□ -0.71
SSBP3-215ENST00000533946 CNTNAP2Q9UHC6 1331 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 A0A087X0B3 334 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 I3L4J1 428 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 INPPL1O15357 1258 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 SLC16A4O15374 487 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 ADAM12O43184 909 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 RECQL4O94761 1208 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 COL9A1P20849 921 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 SYT1P21579 422 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 MARCKSP29966 332 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-215ENST00000533946 RAB27AP51159 221 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 SLC12A3P55017 1021 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 POU5F1BQ06416 359 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 SOX4Q06945 474 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-215ENST00000533946 ORC2Q13416 577 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-215ENST00000533946 KARSQ15046 597 aaKnown RBP10.64□□□□□ -0.71
SSBP3-215ENST00000533946 SF3A1Q15459 793 aaKnown RBP10.64□□□□□ -0.71
SSBP3-215ENST00000533946 TMEM119Q4V9L6 283 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 RARS2Q5T160 578 aaKnown RBP10.64□□□□□ -0.71
SSBP3-215ENST00000533946 SLC27A1Q6PCB7 646 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 PRSS55Q6UWB4 352 aaPredicted RBP10.64□□□□□ -0.71
SSBP3-215ENST00000533946 PPP4R3CPQ6ZMV5 832 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 ZBTB33Q86T24 672 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 RNF135Q8IUD6 432 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 GLYCTKQ8IVS8 523 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 ADHFE1Q8IWW8 467 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 SPRYD3Q8NCJ5 442 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 MCPH1Q8NEM0 835 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 TMEM169Q96HH4 297 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 RPGRIP1Q96KN7 1286 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 TARS2Q9BW92 718 aaKnown RBP10.64□□□□□ -0.71
SSBP3-215ENST00000533946 MTMR6Q9Y217 621 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 FAN1Q9Y2M0 1017 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 DMDP11532 3685 aa10.64□□□□□ -0.71
SSBP3-215ENST00000533946 CCDC169A6NNP5 214 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 TISP43B9A030 160 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 PI4K2BG5E9Z4 385 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 ACKR2O00590 384 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 PLA2G4BP0C869 781 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 CTSAP10619 480 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 PRPHP41219 470 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 KRT17Q04695 432 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 PRPF4BQ13523 1007 aaKnown RBP10.63□□□□□ -0.71
SSBP3-215ENST00000533946 PKP1Q13835 747 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 MCM6Q14566 821 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 SMC1AQ14683 1233 aaKnown RBP10.63□□□□□ -0.71
SSBP3-215ENST00000533946 FAM187BQ17R55 369 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 FOXD4L6Q3SYB3 417 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-215ENST00000533946 ZBTB41Q5SVQ8 909 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 HYIQ5T013 277 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 KIAA0319Q5VV43 1072 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 SCARA3Q6AZY7 606 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 RSPO2Q6UXX9 243 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-215ENST00000533946 FOXD4L3Q6VB84 417 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-215ENST00000533946 TMEM184AQ6ZMB5 413 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 CABP7Q86V35 215 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 EXOC8Q8IYI6 725 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 RNF168Q8IYW5 571 aaPredicted RBP10.63□□□□□ -0.71
SSBP3-215ENST00000533946 C3orf58Q8NDZ4 430 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 ERMNQ8TAM6 284 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 DEPTORQ8TB45 409 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 PGBD4Q96DM1 585 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 ZMAT2Q96NC0 199 aaKnown RBP10.63□□□□□ -0.71
SSBP3-215ENST00000533946 KLHL5Q96PQ7 755 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 MRPL9Q9BYD2 267 aaKnown RBP10.63□□□□□ -0.71
SSBP3-215ENST00000533946 POMKQ9H5K3 350 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 PTPRHQ9HD43 1115 aa10.63□□□□□ -0.71
SSBP3-215ENST00000533946 MYO15AQ9UKN7 3530 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 LOC730098B7Z3J9 87 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 RFPL2O75678 378 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 KIF4AO95239 1232 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 ALDH2P05091 517 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 HARSP12081 509 aaKnown RBP10.62□□□□□ -0.71
SSBP3-215ENST00000533946 SKIP12755 728 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 PLCG1P19174 1290 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 AXLP30530 894 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 PPM1AP35813 382 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 NAMPTP43490 491 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 SPAG1Q07617 926 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 RILPL1Q5EBL4 403 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 RTP2Q5QGT7 225 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 KRT79Q5XKE5 535 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 TMC5Q6UXY8 1006 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 SYT2Q8N9I0 419 aaPredicted RBP10.62□□□□□ -0.71
SSBP3-215ENST00000533946 ZSWIM2Q8NEG5 633 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 URGCPQ8TCY9 931 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 C18orf25Q96B23 403 aaPredicted RBP10.62□□□□□ -0.71
SSBP3-215ENST00000533946 FAM84AQ96KN4 292 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms