RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 IL17AQ16552 155 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 ECM1Q16610 540 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 ANKRD54Q6NXT1 300 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 LLGL2Q6P1M3 1020 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 C1orf186Q6ZWK4 172 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 COLGALT2Q8IYK4 626 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 GPR65Q8IYL9 337 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 SPIRE2Q8WWL2 714 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 MSLNLQ96KJ4 702 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 RIPOR3Q96MK2 946 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 CCDC94Q9BW85 323 aaPredicted RBP10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 PHF7Q9BWX1 381 aaPredicted RBP10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 MRPL4Q9BYD3 311 aaKnown RBP10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 RNF39Q9H2S5 420 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.58□□□□□ -0.721e-6■■■■□ 21.1
FOXRED1-216ENST00000533839 CLEC1BQ9P126 229 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 DNAJB4Q9UDY4 337 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 TNFSF13BQ9Y275 285 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 NR2E1Q9Y466 385 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 HES2Q9Y543 173 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 PRUNE2Q8WUY3 3088 aa10.58□□□□□ -0.72
FOXRED1-216ENST00000533839 EYSQ5T1H1 3165 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 WDR81Q562E7 1941 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 MEIS3P2A8K0S8 358 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 PP2D1A8MPX8 630 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 B4GALT5O43286 388 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 TRAPPC3O43617 180 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 C1RP00736 705 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 SOD2P04179 222 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 ADH1AP07327 375 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 PLS3P13797 630 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 SYT1P21579 422 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 DDIT3P35638 169 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 MTHFRP42898 656 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 NPTX2P47972 431 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 SCNN1GP51170 649 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 TUSC3Q13454 348 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 KYAT1Q16773 422 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 USP41Q3LFD5 358 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 TMEM31Q5JXX7 168 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 PDXDC1Q6P996 788 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 HSCBQ8IWL3 235 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 SMRP1Q8NCR6 262 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 DDX27Q96GQ7 796 aaKnown RBP10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 ZNF396Q96N95 335 aaPredicted RBP10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 PLIN2Q99541 437 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 ZBP1Q9H171 429 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 NXF3Q9H4D5 531 aaKnown RBP10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 SLC38A7Q9NVC3 462 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 KLK14Q9P0G3 267 aa10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 BARX2Q9UMQ3 279 aaPredicted RBP10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 PRG3Q9Y2Y8 225 aaPredicted RBP10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.57□□□□□ -0.72
FOXRED1-216ENST00000533839 MYO7AQ13402 2215 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 C19orf67A6NJJ6 358 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 DCXO43602 365 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 TBX10O75333 385 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 FAM13AO94988 1023 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 MATR3P43243 847 aaKnown RBP eCLIP10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 GLUD2P49448 558 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 ZP2Q05996 745 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 DSC1Q08554 894 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 CYP26C1Q6V0L0 522 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 CDR2LQ86X02 465 aaPredicted RBP10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 KRI1Q8N9T8 703 aaKnown RBP10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 BSNDQ8WZ55 320 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 SNX21Q969T3 373 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 ZFP42Q96MM3 310 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 UROC1Q96N76 676 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 ACAP3Q96P50 834 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 ACO2Q99798 780 aaKnown RBP10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 MMTAG2Q9BU76 263 aaKnown RBP10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 CCSER1Q9C0I3 900 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 CCDC113Q9H0I3 377 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 ADAM7Q9H2U9 754 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 PDZD7Q9H5P4 517 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 POLD4Q9HCU8 107 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 MIOSQ9NXC5 875 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 SNTG2Q9NY99 539 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 ADAM28Q9UKQ2 775 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 ODF2LQ9ULJ1 636 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 GDAQ9Y2T3 454 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 USP15Q9Y4E8 981 aaPredicted RBP10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 PCDHGC5Q9Y5F6 944 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 HCFC2Q9Y5Z7 792 aa10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 SPTBN5Q9NRC6 3674 aaKnown RBP10.56□□□□□ -0.72
FOXRED1-216ENST00000533839 VCANP13611 3396 aa10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 SFI1A8K8P3 1242 aa10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 SLC16A4O15374 487 aa10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 CLDN3O15551 220 aa10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 STX6O43752 255 aa10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 GPR37L1O60883 481 aa10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 TBCAO75347 108 aaKnown RBP10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 MCF2P10911 925 aa10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 AFF1P51825 1210 aaKnown RBP10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 KCNC3Q14003 757 aa10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 HSP90AA2PQ14568 343 aaPredicted RBP10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 CBX2Q14781 532 aaPredicted RBP10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 NT5DC1Q5TFE4 455 aa10.55□□□□□ -0.72
FOXRED1-216ENST00000533839 RRAGBQ5VZM2 374 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms