RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 YME1L1Q96TA2 773 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 GBP3Q9H0R5 595 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 CDT1Q9H211 546 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 PARP2Q9UGN5 583 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 MAPK8IP1Q9UQF2 711 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 INSL6Q9Y581 213 aa12.29□□□□□ -0.44
TRAPPC4-211ENST00000533012 A0A0B4J269 797 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 ABLIM1O14639 778 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 HARSP12081 509 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 HOXD13P35453 343 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 PPP1R2P41236 205 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 RABGGTBP53611 331 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 NOLC1Q14978 699 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 KYAT1Q16773 422 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 SKOR2Q2VWA4 1001 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 LRIT3Q3SXY7 679 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 GLB1LQ6UWU2 654 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 THNSL1Q8IYQ7 743 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 GUF1Q8N442 669 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 TRIML1Q8N9V2 468 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 GOLGA5Q8TBA6 731 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 RSPH1Q8WYR4 309 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 LPPQ93052 612 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 ACAP3Q96P50 834 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 MSTO1Q9BUK6 570 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 CCDC94Q9BW85 323 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 APOL6Q9BWW8 343 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 TMEM117Q9H0C3 514 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 RNF39Q9H2S5 420 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 NXF3Q9H4D5 531 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 SNTG2Q9NY99 539 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 CGNQ9P2M7 1197 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 MSRAQ9UJ68 235 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 AGO2Q9UKV8 859 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 GDAQ9Y2T3 454 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 GIT1Q9Y2X7 761 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 HES2Q9Y543 173 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 PCDHA11Q9Y5I1 949 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 STYXL1Q9Y6J8 313 aa12.28□□□□□ -0.44
TRAPPC4-211ENST00000533012 TBKBP1A7MCY6 615 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 TISP43B9A030 160 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 BIN1O00499 593 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 KIAA0391O15091 583 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 OGTO15294 1046 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 TGFB1I1O43294 461 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 OFD1O75665 1012 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 LDHAP00338 332 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 FGFR1P11362 822 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 ATF7P17544 494 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 GARTP22102 1010 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 AKAP5P24588 427 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 ADSSP30520 456 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 GRM5P41594 1212 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 PRCPP42785 496 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 YARSP54577 528 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 OSTNP61366 133 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 HTRA4P83105 476 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 SMAD3P84022 425 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 STIM1Q13586 685 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 MORC3Q14149 939 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 BTG3Q14201 252 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 RAB30Q15771 203 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 COBLL1Q53SF7 1204 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 CCDC183Q5T5S1 534 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 FAM109BQ6ICB4 259 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 ARMCX5Q6P1M9 558 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 SLC39A4Q6P5W5 647 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 AGMOQ6ZNB7 445 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 SMYD4Q8IYR2 804 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 TET1Q8NFU7 2136 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 SYAP1Q96A49 352 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 ZNF689Q96CS4 500 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 HAPLN2Q9GZV7 340 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 IKZF4Q9H2S9 585 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 RSAD1Q9HA92 442 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 KANSL3Q9P2N6 904 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 SIP14410 1827 aa12.27□□□□□ -0.45
TRAPPC4-211ENST00000533012 PDE4DIPQ5VU43 2346 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 MEIS3P2A8K0S8 358 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 PDXKO00764 312 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 CALUO43852 315 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 CLTAP09496 248 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 HSP90AA2PQ14568 343 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 KLHL40Q2TBA0 621 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 NOMO2Q5JPE7 1267 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 URGCPQ8TCY9 931 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 HELQQ8TDG4 1101 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 CASD1Q96PB1 797 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 GAD1Q99259 594 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 PBX4Q9BYU1 374 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 PCIF1Q9H4Z3 704 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 AGPAT3Q9NRZ7 376 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 TOPORSQ9NS56 1045 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 TYW1Q9NV66 732 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 KLK14Q9P0G3 267 aa12.26□□□□□ -0.45
TRAPPC4-211ENST00000533012 ARL5CA6NH57 179 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 PSMA7O14818 248 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 CLIC2O15247 247 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 EXTL3O43909 919 aa12.25□□□□□ -0.45
TRAPPC4-211ENST00000533012 RECQL4O94761 1208 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms