RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 PLPP4Q5VZY2 271 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 TAS1R3Q7RTX0 852 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 TMEM173Q86WV6 379 aaPredicted RBP16.91■□□□□ 0.3
CPSF1-210ENST00000532935 SPIRE2Q8WWL2 714 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 LARP4BQ92615 738 aaKnown RBP16.91■□□□□ 0.3
CPSF1-210ENST00000532935 IGSF21Q96ID5 467 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 ZFP42Q96MM3 310 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 REEP2Q9BRK0 252 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 IGFLR1Q9H665 355 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 ENTPD7Q9NQZ7 604 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 MIOSQ9NXC5 875 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 CLDND1Q9NY35 253 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 CCDC39Q9UFE4 941 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 PARP2Q9UGN5 583 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 KCNG1Q9UIX4 513 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 ODF2LQ9ULJ1 636 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 NCOR1O75376 2440 aa16.91■□□□□ 0.3
CPSF1-210ENST00000532935 TCHHQ07283 1943 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 SPTLC2O15270 562 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 YEATS4O95619 227 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 BMP1P13497 986 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 DDIT3P35638 169 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 SCNN1GP51170 649 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 SMTNP53814 917 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 CTC1Q2NKJ3 1217 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 DCAF4L1Q3SXM0 396 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 FOXD4L6Q3SYB3 417 aaPredicted RBP16.9■□□□□ 0.3
CPSF1-210ENST00000532935 RRAGBQ5VZM2 374 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 FOXD4L3Q6VB84 417 aaPredicted RBP16.9■□□□□ 0.3
CPSF1-210ENST00000532935 EP400NLQ6ZTU2 488 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 TMEM161BQ8NDZ6 487 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 GSTCDQ8NEC7 633 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 BCL7CQ8WUZ0 217 aaPredicted RBP16.9■□□□□ 0.3
CPSF1-210ENST00000532935 ACO2Q99798 780 aaKnown RBP16.9■□□□□ 0.3
CPSF1-210ENST00000532935 TCF25Q9BQ70 676 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 TMEM175Q9BSA9 504 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 MRPL4Q9BYD3 311 aaKnown RBP16.9■□□□□ 0.3
CPSF1-210ENST00000532935 SNTG2Q9NY99 539 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 KLK14Q9P0G3 267 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 LARSQ9P2J5 1176 aaKnown RBP16.9■□□□□ 0.3
CPSF1-210ENST00000532935 STK17AQ9UEE5 414 aa16.9■□□□□ 0.3
CPSF1-210ENST00000532935 DAXXQ9UER7 740 aaPredicted RBP16.9■□□□□ 0.3
CPSF1-210ENST00000532935 PDCD11Q14690 1871 aaKnown RBP16.89■□□□□ 0.29
CPSF1-210ENST00000532935 PPP6R2O75170 966 aa16.89■□□□□ 0.29
CPSF1-210ENST00000532935 ALDH2P05091 517 aa16.89■□□□□ 0.29
CPSF1-210ENST00000532935 KRT18P05783 430 aaKnown RBP16.89■□□□□ 0.29
CPSF1-210ENST00000532935 NRIP1P48552 1158 aa16.89■□□□□ 0.29
CPSF1-210ENST00000532935 GIT2Q14161 759 aa16.89■□□□□ 0.29
CPSF1-210ENST00000532935 LEXMQ3ZCV2 418 aa16.89■□□□□ 0.29
CPSF1-210ENST00000532935 TMC7Q7Z402 723 aa16.89■□□□□ 0.29
CPSF1-210ENST00000532935 APBB1IPQ7Z5R6 666 aaPredicted RBP16.89■□□□□ 0.29
CPSF1-210ENST00000532935 RBM23Q86U06 439 aaKnown RBP16.89■□□□□ 0.29
CPSF1-210ENST00000532935 COLGALT2Q8IYK4 626 aa16.89■□□□□ 0.29
CPSF1-210ENST00000532935 TARS2Q9BW92 718 aaKnown RBP16.89■□□□□ 0.29
CPSF1-210ENST00000532935 TLE6Q9H808 572 aa16.89■□□□□ 0.29
CPSF1-210ENST00000532935 NGRNQ9NPE2 291 aaKnown RBP16.89■□□□□ 0.29
CPSF1-210ENST00000532935 TNFSF13BQ9Y275 285 aa16.89■□□□□ 0.29
CPSF1-210ENST00000532935 FAN1Q9Y2M0 1017 aa16.89■□□□□ 0.29
CPSF1-210ENST00000532935 BDP1A6H8Y1 2624 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 H3BQ06 376 aaPredicted RBP16.88■□□□□ 0.29
CPSF1-210ENST00000532935 NRP1O14786 923 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 LINC01565O15544 149 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 RECQL4O94761 1208 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 FAM13AO94988 1023 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 MAPTP10636 758 aaKnown RBP16.88■□□□□ 0.29
CPSF1-210ENST00000532935 LTBRP36941 435 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 ZNF131P52739 623 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 NCKAP1LP55160 1127 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 DSC1Q08554 894 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 STRN3Q13033 797 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 ADAM15Q13444 863 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 CCDC73Q6ZRK6 1079 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 DDX53Q86TM3 631 aaKnown RBP16.88■□□□□ 0.29
CPSF1-210ENST00000532935 EFHBQ8N7U6 833 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 ADAMTS19Q8TE59 1207 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 RPS6KC1Q96S38 1066 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 PARVGQ9HBI0 331 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 PTPRHQ9HD43 1115 aa16.88■□□□□ 0.29
CPSF1-210ENST00000532935 HIDE1A8MVS5 230 aa16.87■□□□□ 0.29
CPSF1-210ENST00000532935 H0YCG3 227 aa16.87■□□□□ 0.29
CPSF1-210ENST00000532935 PER2O15055 1255 aa16.87■□□□□ 0.29
CPSF1-210ENST00000532935 TBCAO75347 108 aaKnown RBP16.87■□□□□ 0.29
CPSF1-210ENST00000532935 OR1G1P47890 313 aa16.87■□□□□ 0.29
CPSF1-210ENST00000532935 GRIK3Q13003 919 aa16.87■□□□□ 0.29
CPSF1-210ENST00000532935 SMC1AQ14683 1233 aaKnown RBP16.87■□□□□ 0.29
CPSF1-210ENST00000532935 DUSP6Q16828 381 aa16.87■□□□□ 0.29
CPSF1-210ENST00000532935 VPS52Q8N1B4 723 aa16.87■□□□□ 0.29
CPSF1-210ENST00000532935 MYCT1Q8N699 235 aa16.87■□□□□ 0.29
CPSF1-210ENST00000532935 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.87■□□□□ 0.29
CPSF1-210ENST00000532935 CDCA3Q99618 268 aaPredicted RBP16.87■□□□□ 0.29
CPSF1-210ENST00000532935 ZBP1Q9H171 429 aa16.87■□□□□ 0.29
CPSF1-210ENST00000532935 CDT1Q9H211 546 aa16.87■□□□□ 0.29
CPSF1-210ENST00000532935 GDAQ9Y2T3 454 aa16.87■□□□□ 0.29
CPSF1-210ENST00000532935 PRG3Q9Y2Y8 225 aaPredicted RBP16.87■□□□□ 0.29
CPSF1-210ENST00000532935 A0A087X0B3 334 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 FSD2A1L4K1 749 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 TBX10O75333 385 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 PROZP22891 400 aa16.86■□□□□ 0.29
CPSF1-210ENST00000532935 ANP32AP39687 249 aaKnown RBP16.86■□□□□ 0.29
CPSF1-210ENST00000532935 STAT6P42226 847 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms