RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 E9PCH4 1651 aa11.4□□□□□ -0.58
COLCA1-203ENST00000532918 PRKCEQ02156 737 aa11.4□□□□□ -0.59
COLCA1-203ENST00000532918 NME3Q13232 169 aa11.4□□□□□ -0.59
COLCA1-203ENST00000532918 ELF2Q15723 593 aa11.4□□□□□ -0.59
COLCA1-203ENST00000532918 EFCAB12Q6NXP0 572 aa11.4□□□□□ -0.59
COLCA1-203ENST00000532918 ZNF512Q96ME7 567 aaPredicted RBP11.4□□□□□ -0.59
COLCA1-203ENST00000532918 ZBTB18Q99592 522 aa11.4□□□□□ -0.59
COLCA1-203ENST00000532918 STARD7Q9NQZ5 370 aa11.4□□□□□ -0.59
COLCA1-203ENST00000532918 ANKEF1Q9NU02 776 aa11.4□□□□□ -0.59
COLCA1-203ENST00000532918 DOLKQ9UPQ8 538 aa11.4□□□□□ -0.59
COLCA1-203ENST00000532918 AP3B1O00203 1094 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 PLS3P13797 630 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 INHBEP58166 350 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 SGSM1Q2NKQ1 1148 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 BBS9Q3SYG4 887 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 FRMD5Q7Z6J6 570 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 SOCS4Q8WXH5 440 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 SH3KBP1Q96B97 665 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 CFAP36Q96G28 342 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 SAMSN1Q9NSI8 373 aaKnown RBP11.39□□□□□ -0.59
COLCA1-203ENST00000532918 WDR35Q9P2L0 1181 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 CDC23Q9UJX2 597 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 INO80Q9ULG1 1556 aaPredicted RBP11.39□□□□□ -0.59
COLCA1-203ENST00000532918 CCDC151A5D8V7 595 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 THPOP40225 353 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 KRT31Q15323 416 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 RABEP2Q9H5N1 569 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 PLEKHA5Q9HAU0 1116 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 CARNS1A5YM72 827 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 PI4K2BG5E9Z4 385 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 CDC27P30260 824 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 ATP2C1P98194 919 aaPredicted RBP11.39□□□□□ -0.59
COLCA1-203ENST00000532918 HEATR6Q6AI08 1181 aaKnown RBP11.39□□□□□ -0.59
COLCA1-203ENST00000532918 OXER1Q8TDS5 423 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 ASAP3Q8TDY4 903 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 PYROXD1Q8WU10 500 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 C11orf70Q9BRQ4 267 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 PPP1R12AO14974 1030 aaPredicted RBP11.39□□□□□ -0.59
COLCA1-203ENST00000532918 PLSCR1O15162 318 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 PDHBP11177 359 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 ARL4CP56559 192 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 LAMB3Q13751 1172 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 PDCD2Q16342 344 aaPredicted RBP11.39□□□□□ -0.59
COLCA1-203ENST00000532918 TSGA10IPQ3SY00 556 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 FAM102AQ5T9C2 384 aaPredicted RBP11.39□□□□□ -0.59
COLCA1-203ENST00000532918 ATF7IP2Q5U623 682 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 TRIM67Q6ZTA4 783 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 FAM83AQ86UY5 434 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 SRBD1Q8N5C6 995 aaKnown RBP11.39□□□□□ -0.59
COLCA1-203ENST00000532918 TRIM63Q969Q1 353 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 TMEM143Q96AN5 459 aa11.39□□□□□ -0.59
COLCA1-203ENST00000532918 SEPT5Q99719 369 aaPredicted RBP11.39□□□□□ -0.59
COLCA1-203ENST00000532918 E5RI56 91 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 CASP2P42575 452 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 ACADSBP45954 432 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 ZKSCAN4Q969J2 545 aaPredicted RBP11.38□□□□□ -0.59
COLCA1-203ENST00000532918 OPTNQ96CV9 577 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 DCUN1D1Q96GG9 259 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 CENPKQ9BS16 269 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 STK38LQ9Y2H1 464 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 SNX9Q9Y5X1 595 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 PODXLO00592 558 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 ESRRBO95718 433 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 ARL4DP49703 201 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 SNCBQ16143 134 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 ZNF746Q6NUN9 644 aaPredicted RBP11.38□□□□□ -0.59
COLCA1-203ENST00000532918 VSTM4Q8IW00 320 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 SLITRK1Q96PX8 696 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 PSMD3O43242 534 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 EGFRP00533 1210 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 AMPD2Q01433 879 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 WDR72Q3MJ13 1102 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 SLFNL1Q499Z3 407 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 TTC19Q6DKK2 380 aaPredicted RBP11.38□□□□□ -0.59
COLCA1-203ENST00000532918 PASD1Q8IV76 773 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 PBXIP1Q96AQ6 731 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 PPP1R2P1Q96PQ5 205 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 CCDC188H7C350 402 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 HGSO14964 777 aaPredicted RBP11.38□□□□□ -0.59
COLCA1-203ENST00000532918 GSTA4O15217 222 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 KRT37O76014 449 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 PLTPP55058 493 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 PHEXP78562 749 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 CXCL9Q07325 125 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 CYP4A22Q5TCH4 519 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 CYP4F22Q6NT55 531 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 CD302Q8IX05 232 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 SLC35F6Q8N357 371 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 USP6NLQ92738 828 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 SIK2Q9H0K1 926 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 PARVAQ9NVD7 372 aa11.38□□□□□ -0.59
COLCA1-203ENST00000532918 LGALS16A8MUM7 142 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 ZNF197O14709 1029 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 KDM1AO60341 852 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 NDUFA10O95299 355 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 LARGE1O95461 756 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 MX2P20592 715 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 ATICP31939 592 aa11.37□□□□□ -0.59
COLCA1-203ENST00000532918 DR1Q01658 176 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms