RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 HERC4Q5GLZ8 1057 aaPredicted RBP9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 CLLU1OSQ5K130 101 aa9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 SPOUT1Q5T280 376 aaKnown RBP9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 TMEM184AQ6ZMB5 413 aa9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 LRRC55Q6ZSA7 311 aa9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 ANO5Q75V66 913 aa9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 TRMT1LQ7Z2T5 733 aaKnown RBP9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 EXOC8Q8IYI6 725 aa9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 THNSL1Q8IYQ7 743 aa9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 ABI1Q8IZP0 508 aa9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 LINC00528Q8N1L1 170 aa9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 MRPS27Q92552 414 aaKnown RBP9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 ZNF558Q96NG5 402 aa9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 MRPL9Q9BYD2 267 aaKnown RBP9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 INO80BQ9C086 356 aaPredicted RBP9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 IGFLR1Q9H665 355 aa9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 TLE6Q9H808 572 aa9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 NGRNQ9NPE2 291 aaKnown RBP9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 KCNJ14Q9UNX9 436 aa9.65□□□□□ -0.86
PTP4A2-213ENST00000532001 ZDBF2Q9HCK1 2354 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 FAM86C2PA6NEL3 165 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 H3BQV1 296 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 EML1O00423 815 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 GAS2O43903 313 aaKnown RBP9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 P4HBP07237 508 aaKnown RBP9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 SRGAP2BP0DMP2 458 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 ZSCAN22P10073 491 aaPredicted RBP9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 SKIP12755 728 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 IBSPP21815 317 aaPredicted RBP9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 QARSP47897 775 aaKnown RBP9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 RAB27AP51159 221 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 ERVFC1P60507 584 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 CBX2Q14781 532 aaPredicted RBP9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 CLUL1Q15846 466 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 LETM2Q2VYF4 491 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 PPP1R26Q5T8A7 1209 aaPredicted RBP9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 KCNT2Q6UVM3 1135 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 SLC39A11Q8N1S5 342 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 SUSD6Q92537 303 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 HAS1Q92839 578 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 TNFRSF25Q93038 417 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 FAM122AQ96E09 287 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 SCLT1Q96NL6 688 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 DHX33Q9H6R0 707 aaKnown RBP9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 SPG21Q9NZD8 308 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 SUCLA2Q9P2R7 463 aaPredicted RBP9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 NXF1Q9UBU9 619 aaKnown RBP9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 PUF60Q9UHX1 559 aaKnown RBP9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 MTMR6Q9Y217 621 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 PCDHGC5Q9Y5F6 944 aa9.64□□□□□ -0.87
PTP4A2-213ENST00000532001 A0A087WZ62 844 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 VPS37CA5D8V6 355 aaPredicted RBP9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 TMEM150BA6NC51 233 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 LOC730098B7Z3J9 87 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 ZNF623O75123 536 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 CSPG5O95196 566 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 PHKA2P46019 1235 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 KRT17Q04695 432 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 SPIRE1Q08AE8 756 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 PKP1Q13835 747 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 EPHA7Q15375 998 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 SAFBQ15424 915 aaKnown RBP eCLIP9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 LCE2CQ5TA81 110 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 C4orf19Q8IY42 314 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 SLFN12Q8IYM2 578 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 VN1R2Q8NFZ6 395 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 HELQQ8TDG4 1101 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 SLC7A3Q8WY07 619 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 FDXACB1Q9BRP7 624 aaPredicted RBP9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 KCNH6Q9H252 994 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 ZSCAN16Q9H4T2 348 aaPredicted RBP9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 BRMS1Q9HCU9 246 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 CYP26B1Q9NR63 512 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 PGPEP1Q9NXJ5 209 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 BARX2Q9UMQ3 279 aaPredicted RBP9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 USP15Q9Y4E8 981 aaPredicted RBP9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 ATP6V1DQ9Y5K8 247 aa9.63□□□□□ -0.87
PTP4A2-213ENST00000532001 DENND4AQ7Z401 1863 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 CCNT1O60563 726 aaKnown RBP9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 LYPLA2O95372 231 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 F13A1P00488 732 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 HOXB8P17481 243 aaPredicted RBP9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 FGFR4P22455 802 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 U2AF2P26368 475 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 KRT2P35908 639 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 DHX9Q08211 1270 aaKnown RBP9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 SMC1AQ14683 1233 aaKnown RBP9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 PCBP1Q15365 356 aaKnown RBP eCLIP9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 INTS6LQ5JSJ4 861 aaKnown RBP9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 C6orf118Q5T5N4 469 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 PLPP4Q5VZY2 271 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 PLA2G4FQ68DD2 849 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 PIK3AP1Q6ZUJ8 805 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 BRAPQ7Z569 592 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 RBM23Q86U06 439 aaKnown RBP9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 RHPN2Q8IUC4 686 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 RNF135Q8IUD6 432 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 NPAS3Q8IXF0 933 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 MICAL1Q8TDZ2 1067 aa9.62□□□□□ -0.87
PTP4A2-213ENST00000532001 PSPC1Q8WXF1 523 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms