RNA–Protein interactions for RNA: ENST00000531744.5

SDHD-212, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-212ENST00000531744 C8orf76Q96K31 380 aa13.9□□□□□ -0.18
SDHD-212ENST00000531744 LLPHQ9BRT6 129 aaKnown RBP13.9□□□□□ -0.18
SDHD-212ENST00000531744 GPR62Q9BZJ7 368 aa13.9□□□□□ -0.18
SDHD-212ENST00000531744 FOXP1Q9H334 677 aaPredicted RBP13.9□□□□□ -0.18
SDHD-212ENST00000531744 KLK14Q9P0G3 267 aa13.9□□□□□ -0.18
SDHD-212ENST00000531744 PTGESO14684 152 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 N4BP1O75113 896 aaKnown RBP13.89□□□□□ -0.19
SDHD-212ENST00000531744 CD2BP2O95400 341 aaKnown RBP13.89□□□□□ -0.19
SDHD-212ENST00000531744 SRGAP2BP0DMP2 458 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 TCF15Q12870 199 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 TRIM29Q14134 588 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 TFDP1Q14186 410 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 PCBP1Q15365 356 aaKnown RBP eCLIP13.89□□□□□ -0.19
SDHD-212ENST00000531744 FAM187BQ17R55 369 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 TTC38Q5R3I4 469 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 EEF1DP3Q658K8 133 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 KREMEN2Q8NCW0 462 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 PBXIP1Q96AQ6 731 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 KIFC3Q9BVG8 833 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 PDZD7Q9H5P4 517 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 RXFP1Q9HBX9 757 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 TSHZ2Q9NRE2 1034 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 CHST7Q9NS84 486 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 KANSL3Q9P2N6 904 aa13.89□□□□□ -0.19
SDHD-212ENST00000531744 LRRIQ4A6NIV6 560 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 PP2D1A8MPX8 630 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 C2CD2LO14523 706 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 TEX28O15482 410 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 PAPLNO95428 1278 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 MYBP10242 640 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 CYP11B2P19099 503 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 U2AF2P26368 475 aaKnown RBP eCLIP13.88□□□□□ -0.19
SDHD-212ENST00000531744 OR1G1P47890 313 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 GIT2Q14161 759 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 SLC27A1Q6PCB7 646 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 PADI6Q6TGC4 694 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 GPR149Q86SP6 731 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 NOSTRINQ8IVI9 506 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 CNNM3Q8NE01 707 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 RPS6KC1Q96S38 1066 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 DZANK1Q9NVP4 752 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 GIT1Q9Y2X7 761 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 PCDHB6Q9Y5E3 794 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 COL4A3Q01955 1670 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 DCHS1Q96JQ0 3298 aa13.88□□□□□ -0.19
SDHD-212ENST00000531744 MTHFRP42898 656 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 FXR2P51116 673 aaKnown RBP eCLIP13.87□□□□□ -0.19
SDHD-212ENST00000531744 DSG1Q02413 1049 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 NT5DC1Q5TFE4 455 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 CES5AQ6NT32 575 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 CD300LGQ6UXG3 332 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 KCNK18Q7Z418 384 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 ALYREFQ86V81 257 aaKnown RBP13.87□□□□□ -0.19
SDHD-212ENST00000531744 ZDHHC14Q8IZN3 488 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 DAW1Q8N136 415 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 FBXL6Q8N531 539 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 ZNF707Q96C28 371 aaPredicted RBP13.87□□□□□ -0.19
SDHD-212ENST00000531744 MFSD14AQ96MC6 490 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 NECTIN4Q96NY8 510 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 FAM193BQ96PV7 902 aaPredicted RBP13.87□□□□□ -0.19
SDHD-212ENST00000531744 NACC1Q96RE7 527 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 MMTAG2Q9BU76 263 aaKnown RBP13.87□□□□□ -0.19
SDHD-212ENST00000531744 UBN1Q9NPG3 1134 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 LIMD1Q9UGP4 676 aa13.87□□□□□ -0.19
SDHD-212ENST00000531744 FANCMQ8IYD8 2048 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 ZMYM2Q9UBW7 1377 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 CACNA1IQ9P0X4 2223 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 CARNS1A5YM72 827 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 MEFVO15553 781 aaPredicted RBP13.86□□□□□ -0.19
SDHD-212ENST00000531744 RFPL2O75678 378 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 SPATA31D3P0C874 917 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 KLRC2P26717 231 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 CDC25AP30304 524 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 RBM25P49756 843 aaKnown RBP13.86□□□□□ -0.19
SDHD-212ENST00000531744 ORC2Q13416 577 aaPredicted RBP13.86□□□□□ -0.19
SDHD-212ENST00000531744 RTP2Q5QGT7 225 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 SPATA31D4Q6ZUB0 917 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 TAS1R3Q7RTX0 852 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 CABP7Q86V35 215 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 IGSF22Q8N9C0 903 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 MCPH1Q8NEM0 835 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 PRIMPOLQ96LW4 560 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 KCNH6Q9H252 994 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 SFXN1Q9H9B4 322 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 MAN1C1Q9NR34 630 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 MRPL17Q9NRX2 175 aaKnown RBP13.86□□□□□ -0.19
SDHD-212ENST00000531744 SNTG2Q9NY99 539 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 NR2E1Q9Y466 385 aa13.86□□□□□ -0.19
SDHD-212ENST00000531744 ZFHX2Q9C0A1 2572 aaPredicted RBP13.86□□□□□ -0.19
SDHD-212ENST00000531744 FRYLO94915 3013 aa13.85□□□□□ -0.19
SDHD-212ENST00000531744 RIF1Q5UIP0 2472 aaKnown RBP13.85□□□□□ -0.19
SDHD-212ENST00000531744 PRKCBP05771 671 aa13.85□□□□□ -0.19
SDHD-212ENST00000531744 RPL17P18621 184 aaKnown RBP13.85□□□□□ -0.19
SDHD-212ENST00000531744 GLUD2P49448 558 aa13.85□□□□□ -0.19
SDHD-212ENST00000531744 GRIK3Q13003 919 aa13.85□□□□□ -0.19
SDHD-212ENST00000531744 MAPK7Q13164 816 aa13.85□□□□□ -0.19
SDHD-212ENST00000531744 PTGDRQ13258 359 aa13.85□□□□□ -0.19
SDHD-212ENST00000531744 SAFBQ15424 915 aaKnown RBP eCLIP13.85□□□□□ -0.19
SDHD-212ENST00000531744 ATAT1Q5SQI0 421 aa13.85□□□□□ -0.19
SDHD-212ENST00000531744 FUT10Q6P4F1 479 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms