RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 ARHGEF16Q5VV41 709 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 PLA2G4FQ68DD2 849 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 SEPT14Q6ZU15 432 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 DHX38Q92620 1227 aaKnown RBP12.13□□□□□ -0.47
NXF1-211ENST00000531709 LBHD1Q9BQE6 289 aaPredicted RBP12.13□□□□□ -0.47
NXF1-211ENST00000531709 OSBPL7Q9BZF2 842 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.13□□□□□ -0.47
NXF1-211ENST00000531709 PCDHB4Q9Y5E5 795 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 MYO3BQ8WXR4 1341 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 IL9RQ01113 521 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 MTMR1Q13613 665 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 CBWD2Q8IUF1 395 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 SEPT12Q8IYM1 358 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.13□□□□□ -0.47
NXF1-211ENST00000531709 MAIP1Q8WWC4 291 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 ZKSCAN4Q969J2 545 aaPredicted RBP12.13□□□□□ -0.47
NXF1-211ENST00000531709 SUGT1Q9Y2Z0 365 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 SLIT2O94813 1529 aa12.13□□□□□ -0.47
NXF1-211ENST00000531709 TIAM2Q8IVF5 1701 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 PFASO15067 1338 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 GTPBP10A4D1E9 387 aaKnown RBP12.12□□□□□ -0.47
NXF1-211ENST00000531709 PI4K2BG5E9Z4 385 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 P4HBP07237 508 aaKnown RBP12.12□□□□□ -0.47
NXF1-211ENST00000531709 KRT39Q6A163 491 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 ATP8B4Q8TF62 1192 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 TATDN2Q93075 761 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 NOD2Q9HC29 1040 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 SAYSD1Q9NPB0 183 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 TPX2Q9ULW0 747 aaKnown RBP12.12□□□□□ -0.47
NXF1-211ENST00000531709 FOXO6A8MYZ6 492 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 CD58P19256 250 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 CA4P22748 312 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 PIK3CAP42336 1068 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 QARSP47897 775 aaKnown RBP12.12□□□□□ -0.47
NXF1-211ENST00000531709 STRN3Q13033 797 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 MOXD1Q6UVY6 613 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 IQCGQ9H095 443 aaKnown RBP12.12□□□□□ -0.47
NXF1-211ENST00000531709 ETNK1Q9HBU6 452 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 L3MBTL1Q9Y468 752 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 ADAMTSL3P82987 1691 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 H0Y3Z8 333 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 KIAA0391O15091 583 aaKnown RBP12.12□□□□□ -0.47
NXF1-211ENST00000531709 CD19P15391 556 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 PPP3CAQ08209 521 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 SNRNP35Q16560 246 aaKnown RBP12.12□□□□□ -0.47
NXF1-211ENST00000531709 C1orf186Q6ZWK4 172 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 NLGN1Q8N2Q7 840 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 LARGE2Q8N3Y3 721 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 FAM84AQ96KN4 292 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 AGBL1Q96MI9 1066 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 TMEM117Q9H0C3 514 aa12.12□□□□□ -0.47
NXF1-211ENST00000531709 CDC42EP4Q9H3Q1 356 aaKnown RBP12.12□□□□□ -0.47
NXF1-211ENST00000531709 RAVER2Q9HCJ3 691 aaKnown RBP12.12□□□□□ -0.47
NXF1-211ENST00000531709 USP15Q9Y4E8 981 aaPredicted RBP12.12□□□□□ -0.47
NXF1-211ENST00000531709 BTNL10A8MVZ5 291 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 RARAP10276 462 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 ELF1P32519 619 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 HOXD13P35453 343 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 ITGA8P53708 1063 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 BRDTQ58F21 947 aaPredicted RBP12.11□□□□□ -0.47
NXF1-211ENST00000531709 EPM2AIP1Q7L775 607 aaPredicted RBP12.11□□□□□ -0.47
NXF1-211ENST00000531709 ANKRD35Q8N283 1001 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 PRELID2Q8N945 189 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 LRRC8CQ8TDW0 803 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 TOPORSQ9NS56 1045 aaPredicted RBP12.11□□□□□ -0.47
NXF1-211ENST00000531709 RAB20Q9NX57 234 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 CTNNAL1Q9UBT7 734 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 COG5Q9UP83 839 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 TCRBV7S2A1N4TA0A589 114 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 LRRIQ4A6NIV6 560 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 SGK1O00141 431 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 UBOX5O94941 541 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 YWHABP31946 246 aaKnown RBP12.11□□□□□ -0.47
NXF1-211ENST00000531709 YTHDF3Q7Z739 585 aaKnown RBP12.11□□□□□ -0.47
NXF1-211ENST00000531709 WDR18Q9BV38 432 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 KCNH7Q9NS40 1196 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 SEPT9Q9UHD8 586 aaPredicted RBP12.11□□□□□ -0.47
NXF1-211ENST00000531709 EDIL3O43854 480 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 ADRA2BP18089 450 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 ERMARDQ5T6L9 678 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 DAB2IPQ5VWQ8 1189 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 DUPD1Q68J44 220 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 FBXL13Q8NEE6 735 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 SMC6Q96SB8 1091 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 ZNF341Q9BYN7 854 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 SIX2Q9NPC8 291 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 ADAM22Q9P0K1 906 aa12.11□□□□□ -0.47
NXF1-211ENST00000531709 CYP3A7-CYP3A51PA0A087WV96 503 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 RIPK2O43353 540 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 PPFIA2O75334 1257 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 CYP3A7P24462 503 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 TMEM270Q6UE05 265 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 SPATA21Q7Z572 469 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 P3H4Q92791 437 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 SNF8Q96H20 258 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 PWWP2AQ96N64 755 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 ABCF3Q9NUQ8 709 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 SLC12A6Q9UHW9 1150 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 IGF2BP3O00425 579 aaKnown RBP eCLIP12.1□□□□□ -0.47
NXF1-211ENST00000531709 RARGP13631 454 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms